PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG008520.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 346aa    MW: 37643.3 Da    PI: 8.8785
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG008520.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS201.16.4e-6266285120313
              GRAS 120 sqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp....gEalaVnlvl 208
                       +qG+QWpaLlqaLa Rp+g ps+R+Tgvg+p+++++++l+++g++La+fA +++v+f+++ l a +l+dle+ +L+ +      E++ Vn+v+
  TRIDC7BG008520.1  66 KQGMQWPALLQALALRPGGIPSFRLTGVGPPQPDETDALQQMGWKLAQFAYTIRVDFQYRGLGAATLADLEPFMLQPEDsneePEVISVNSVF 158
                       79*************************************************************************766666679********* PP

              GRAS 209 qlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak........................... 274
                       ++hrll++++++e+    vL +v+ ++P++v+vveqe +hns++Fl+rf+e  +yys++fds+                              
  TRIDC7BG008520.1 159 EMHRLLAQPGAMEK----VLGTVRAVRPRIVTVVEQEGNHNSGTFLDRFTEH-YYYSTMFDSWTRCtttppcsipsraaapaahpkshrgaav 246
                       **************....********************************97.699*******544489***********************9 PP

              GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetle 313
                       +p+++ +++++++++lgr+i+nvvacegaer+erhetl+
  TRIDC7BG008520.1 247 APAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLG 285
                       89999*******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MRWRREWRSP PGQNSTTTQE KRGAASKSAK SVGRNGWSSS RRMRFSAAAR SSLCFLATAR  60
RSTTFKQGMQ WPALLQALAL RPGGIPSFRL TGVGPPQPDE TDALQQMGWK LAQFAYTIRV  120
DFQYRGLGAA TLADLEPFML QPEDSNEEPE VISVNSVFEM HRLLAQPGAM EKVLGTVRAV  180
RPRIVTVVEQ EGNHNSGTFL DRFTEHYYYS TMFDSWTRCT TTPPCSIPSR AAAPAAHPKS  240
HRGAAVAPAA AGTDQVMSEV YLGRQICNVV ACEGAERTER HETLGPSGVA GEEAESARMA  300
AHSTSPDRCG RSAADGRGEH TVAAAAMAAD GVQSKESRDR LDRCAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.14e-77GRAS family protein