PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG002910.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 274aa    MW: 31420.6 Da    PI: 6.3119
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG002910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.56.3e-13158204147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +g WT+eE+ l++++    G g Wk I++++ + Rt+ q+ s+ qky
  TRIDC7BG002910.1 158 KGFWTPEEHRLFLHGLSACGRGKWKDISKYFVTSRTPAQISSHAQKY 204
                       688*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MNQRVIQEWN PSEVEGARSI IDRLNNYYNC DGTSNEKNKK HDIVANLKAW FPKKTMQQVT  60
DLYDDLVMEM HMLKCPEKEY NGTNSNHGVI YTVDGLVNKN FGLQEEVPIE GMGILFGHPL  120
ESMQTKEIQE EVQMVEENKV VLENKMCIPQ PVLAPRAKGF WTPEEHRLFL HGLSACGRGK  180
WKDISKYFVT SRTPAQISSH AQKYFMRLQS KGSGSQRYSI NDVELDDADP WKMENSFNFW  240
QALALKSTIG VDNQNPSFHL QTPSSPFVTM NNIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10580.24e-21MYB_related family protein