PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG001390.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 219aa    MW: 24842 Da    PI: 6.2266
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG001390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.18.3e-13103149147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +g WT++E+ l++++    G g Wk I++++ + Rt+ q+ s+ qky
  TRIDC7BG001390.1 103 KGFWTPDEHRLFLHGLSVCGRGKWKDISKHFVTSRTPTQISSHAQKY 149
                       688*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MQQVTNLYVD FGAEMHMLQC PEKECHVTNS DHGVNYTVDG PVSKYFGLQE EAAMEGTDFL  60
FGCPLDIRKT IDSQEEVPMV EQNKVVLENK TFIHQPVLAP HAKGFWTPDE HRLFLHGLSV  120
CGRGKWKDIS KHFVTSRTPT QISSHAQKYF MRLKSKGSGS QRYSINDVEL DDANPWKMEN  180
SFNFWQALAL QSTIGADNQN PSFNLQTPSS PFVTMNNIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10580.21e-21MYB_related family protein