PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG000610.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 453aa MW: 49934.6 Da PI: 6.5149

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG000610.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.8	7.6e-35	12	141	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdke 91 lppG++F Ptd el+v+yL++k++g++ +l v+k+v i+++ P+++ ++ +e++wyfF+kr +kyatg+r+ r+t +gyWkatg ++ TRIDC7BG000610.1 12 LPPGYHFAPTDVELIVHYLRRKMDGHPPHL-PVFKDVPITDYRPEQITeVFMDCGEERWYFFTKRTRKYATGNRPDRTTPgRGYWKATGPQRL 103 79***********************998.89**********8557778999****************77659********* PP NAM 92 vlskkgel...vglkktLvfykgrapkgektdWvmheyr 127 + + +++ vg ++tLvfy+g ++ kt W+m ey+ TRIDC7BG000610.1 104 IRTGPSKAyplVGRRRTLVFYTGPDEA-AKTAWTMYEYE 141 9974443666*******876655.7*******6 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MEEGKQRLVL SLPPGYHFAP TDVELIVHYL RRKMDGHPPH LPVFKDVPIT DYRPEQITEV 60 FMDCGEERWY FFTKRTRKYA TGNRPDRTTP GRGYWKATGP QRLIRTGPSK AYPLVGRRRT 120 LVFYTGPDEA AKTAWTMYEY ENLTSEEEAN DKNADKLGEW VLCTIQRQKS QRVGDDTIKG 180 KAKGESKAGG RKRKGKAQKG ADDQVLQIQG TQEVAEKVDE TDMFELEQAS RPNKRPQLMQ 240 QQHDEPPPPP PCPETLIPAQ DCDYDLGTVP PSQEPPQQLS DSEMVASRPG ASCYGFDESM 300 LLSLLEYETM APLLLGYNNY STTPYQPATS YLDAAAAPLG AFSYGYGGAA HQPAGQLNNG 360 GYAGGHPSSL LGTSNSTYTY PQQHSYAAGS STYTYLQQHS HPAGTNKLAP SNSTYTYQLQ 420 QSCAAGANKL ALARGAMSSG IGQGSDVQPQ VEL

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MEEGKQRLVL SLPPGYHFAP TDVELIVHYL RRKMDGHPPH LPVFKDVPIT DYRPEQITEV  60
FMDCGEERWY FFTKRTRKYA TGNRPDRTTP GRGYWKATGP QRLIRTGPSK AYPLVGRRRT  120
LVFYTGPDEA AKTAWTMYEY ENLTSEEEAN DKNADKLGEW VLCTIQRQKS QRVGDDTIKG  180
KAKGESKAGG RKRKGKAQKG ADDQVLQIQG TQEVAEKVDE TDMFELEQAS RPNKRPQLMQ  240
QQHDEPPPPP PCPETLIPAQ DCDYDLGTVP PSQEPPQQLS DSEMVASRPG ASCYGFDESM  300
LLSLLEYETM APLLLGYNNY STTPYQPATS YLDAAAAPLG AFSYGYGGAA HQPAGQLNNG  360
GYAGGHPSSL LGTSNSTYTY PQQHSYAAGS STYTYLQQHS HPAGTNKLAP SNSTYTYQLQ  420
QSCAAGANKL ALARGAMSSG IGQGSDVQPQ VEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	3e-33	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG000610.1