PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG073620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 31859.3 Da PI: 8.1 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.9e-17 | 8 | 53 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd l ++v+++G ++W++I r ++ gR++k+c++rw + TRIDC7AG073620.1 8 RGPWSPEEDGALRRLVELHGARNWTAIGRGVP-GRSGKSCRLRWCNQ 53 89******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 48.3 | 2.4e-15 | 60 | 102 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r ++T+eEd +++a+++ G++ W++Iar + gRt++ +k++w+ TRIDC7AG073620.1 60 RRPFTAEEDTVIARAHARIGNR-WAAIARLLR-GRTDNAVKNHWN 102 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MEGCDRIRGP WSPEEDGALR RLVELHGARN WTAIGRGVPG RSGKSCRLRW CNQLSPGVER 60 RPFTAEEDTV IARAHARIGN RWAAIARLLR GRTDNAVKNH WNCSLKRRLG DLGADGVTEG 120 DLDERPCKRA SVTPESTSGS GSGSGSGSDR SDVSHGGAFG LGQVYRPVAR AGGFEPADCA 180 MSQRHEEEQE DPFTSLSLSL PGTDAHGFHH DSSHSHFHQP SPSPSPPPAT ASTTPPPASS 240 YPFSPAFAAA MQEMIRDEVR RYISGVSCGS NLPSMPQLVD GVMRAAAERA GGVSRMR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 2e-60 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG073620.1 |