PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072620.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 782aa MW: 89092.1 Da PI: 5.852

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072620.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62	1.8e-19	57	143	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY +Y+ + GF ++++++++ +g +++tf Csk g+++ ++ ++ ++ t+tgCkak+ vk + +++wev+ leleHnH+l TRIDC7AG072620.7 57 QFYVAYGCHSGFGITRRSNNTF--DGFRYRSTFICSKGGQSRLRSGV--TRPARKRGTKTGCKAKIIVKDAHfQNRWEVIVLELEHNHPLD 143 6**************99988..9999**********99877..77788889***********9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 782 aa Download sequence
MEEEGYSTES SNEGDVQEDG DKEKSLAEGD VFKPVDMDPE WIPKVGMVFD SEEDAFQFYV 60 AYGCHSGFGI TRRSNNTFDG FRYRSTFICS KGGQSRLRSG VTRPARKRGT KTGCKAKIIV 120 KDAHFQNRWE VIVLELEHNH PLDPGSVKYK KHLENIPFSL NPPRLSEAPQ SSSVVGHSSS 180 FGDSGIPSSA QIEIKTKIDR NRKLKLAEGD LEALVSFFND MQDRNPCFFH SLDMNEQGQL 240 RNVFWADAKS RSSYNYFGDV VAINVTNFSD QYDIQFVSFV GTNHHAQPLL LGCGLLAGRS 300 LGAYVWLFDT WLRCMNATSP PSIITNYCHD VAIAVKKVFP NSRHRFCLRH ILNELPEKLA 360 GMEKKDEVIS TFSTLAYDSV TTLDFDKEWQ EMTHQFQLEG NEWLSKLYEV RAQWAPAYVK 420 DFFWAGMSVT DRTDSATDYF DGWLTSDTSV KMFVEQYEAA VRTKLEKETY EDLHSSQMRP 480 QLMTGLPVEE QAAKMYTMEI FQTFLNELGR SFHCNYSILD RSDSVVTYIV SEHVNQTKVD 540 YKVAYDNAED DIWCFCRLFQ FKGILCRHAL TVLRQELVPM IPSKYIIHRW CKDCKLTCSS 600 MSRDVSLSSQ ELGGYDDLYK LGHQYFAEVV ELGSVNSESK DYALSVMREI RDKVISYEKS 660 LRDQRVDSQV STANFAYNPV NEDFTDDALP ISLSTKGWDL MQGQSKRSRK KKLTTPTVLD 720 TLKKKTKRAY NKRRNATANN LCTTVTATDS ITESANVQED QVNEGWPLTS SGAPDTFPYG 780 VE

Sequence ? help Back to Top

Protein Sequence Length: 782 aa Download sequence

MEEEGYSTES SNEGDVQEDG DKEKSLAEGD VFKPVDMDPE WIPKVGMVFD SEEDAFQFYV  60
AYGCHSGFGI TRRSNNTFDG FRYRSTFICS KGGQSRLRSG VTRPARKRGT KTGCKAKIIV  120
KDAHFQNRWE VIVLELEHNH PLDPGSVKYK KHLENIPFSL NPPRLSEAPQ SSSVVGHSSS  180
FGDSGIPSSA QIEIKTKIDR NRKLKLAEGD LEALVSFFND MQDRNPCFFH SLDMNEQGQL  240
RNVFWADAKS RSSYNYFGDV VAINVTNFSD QYDIQFVSFV GTNHHAQPLL LGCGLLAGRS  300
LGAYVWLFDT WLRCMNATSP PSIITNYCHD VAIAVKKVFP NSRHRFCLRH ILNELPEKLA  360
GMEKKDEVIS TFSTLAYDSV TTLDFDKEWQ EMTHQFQLEG NEWLSKLYEV RAQWAPAYVK  420
DFFWAGMSVT DRTDSATDYF DGWLTSDTSV KMFVEQYEAA VRTKLEKETY EDLHSSQMRP  480
QLMTGLPVEE QAAKMYTMEI FQTFLNELGR SFHCNYSILD RSDSVVTYIV SEHVNQTKVD  540
YKVAYDNAED DIWCFCRLFQ FKGILCRHAL TVLRQELVPM IPSKYIIHRW CKDCKLTCSS  600
MSRDVSLSSQ ELGGYDDLYK LGHQYFAEVV ELGSVNSESK DYALSVMREI RDKVISYEKS  660
LRDQRVDSQV STANFAYNPV NEDFTDDALP ISLSTKGWDL MQGQSKRSRK KKLTTPTVLD  720
TLKKKTKRAY NKRRNATANN LCTTVTATDS ITESANVQED QVNEGWPLTS SGAPDTFPYG  780
VE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-110	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072620.7