PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG069270.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 469aa    MW: 50461.3 Da    PI: 6.3263
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG069270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.84.2e-11129188155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++gr++A+++d  +   g  ++    + g ++ +e+Aa+a++ a++k++g
  TRIDC7AG069270.1 129 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKeIGGNAGGYDKEEKAARAYDMAALKYWG 188
                       57*******************65555446533577799********************98 PP
2AP247.44.7e-15231282155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  TRIDC7AG069270.1 231 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 282
                       57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    
MDMDMSSATH PAHHWLSFSL SNNYHHGLLE ALSSSSSGHQ IAGEEGTVDE APKMEDFLGG  60
VGGAGTTSTA VVDHGELGSI AAGFLHRYPA HDGTLDQNSG AVTVAAATME VAESDQARRP  120
AETFGQRTSI YRGVTRHRWT GRYEAHLWDN SCRREGQSRK EIGGNAGGYD KEEKAARAYD  180
MAALKYWGPT TTTNFPVANY EKELEEMKSM TRQEFIASLR RKSSGFSRGA SIYRGVTRHH  240
QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGLNAVTNFD MSRYDVESIL  300
NSDLPIGAGA AARASKFQPD VLSLPAPNVA SPDMLPPAEK DYWSLLAMHY QQQQQHHLQQ  360
QQFPASAFET YGSGVNVDFT MGMSGTNNPS GGGATVWGAT GPTGHGDGSR QSNSYSSNIP  420
YASMVSGSAA SAGGGYEGST GNNGTWVTTS NPAASATAPQ YYNYLFGME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.11e-115AP2 family protein