PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG058040.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 515aa    MW: 58407.2 Da    PI: 8.2196
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG058040.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.72.2e-2376177199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae++       + +++  ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F   +
  TRIDC7AG058040.9  76 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 164
                       99*****************************954.4444.48************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++++l+++++r+
  TRIDC7AG058040.9 165 DERQQLLLGIRRA 177
                       577888***9997 PP
2Auxin_resp119.33.1e-39202285183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+  +rr++Gt++g++dldpvrW+nS+Wr+L+
  TRIDC7AG058040.9 202 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 285
                       79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    
QVAASMQKDV DAHVPNYPNL PSKLICLLHN ITLHADLETD EVYAQMTLQP VTSYGKEALQ  60
LSELALKQAR PQNEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIQARD  120
LHDNVWTFRH IYRGQPKRHL LTTGWSLFVS GKRLFAGDSV IFVRDERQQL LLGIRRANRQ  180
PTNISSSVLS SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPTEFVIPFA KYQKAVYGNQ  240
LSLGMRFRMM FETEELGTRR YMGTITGIND LDPVRWKNSQ WRNLQVGWDE SAAGERRNRV  300
SIWEIEPVAA PFFICPPPFF GAKRPRQLDD ESSEMENLLK RAMPWLGEEI CIKDPQTQNT  360
IMPGLSLVQW MNMNMQQSSS FANTAMQSEY LRSITNPSMQ NIGSGDLSRQ LCLQNQLLQQ  420
NNMQFNTPKL PQQMQPNNEL SKAALPLNQN GASIKPEEQT QDTSNFQRQQ QSMNYTLPLS  480
QAQTSLAQAQ VLIQSQMQQQ QQQQQQPHIS QNQLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein