PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG058040.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 488aa    MW: 55509.8 Da    PI: 8.8996
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG058040.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.82e-2349150199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae++       + +++  ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F   +
  TRIDC7AG058040.8  49 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 137
                       99*****************************954.4444.48************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++++l+++++r+
  TRIDC7AG058040.8 138 DERQQLLLGIRRA 150
                       577888***9997 PP
2Auxin_resp119.42.8e-39175258183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+  +rr++Gt++g++dldpvrW+nS+Wr+L+
  TRIDC7AG058040.8 175 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 258
                       79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    
SSQNFPSVQV YANRVICILF GLDYDQYGKE ALQLSELALK QARPQNEFFC KTLTASDTST  60
HGGFSVPRRA AEKIFPPLDF SMQPPAQEIQ ARDLHDNVWT FRHIYRGQPK RHLLTTGWSL  120
FVSGKRLFAG DSVIFVRDER QQLLLGIRRA NRQPTNISSS VLSSDSMHIG ILAAAAHAAA  180
NNSPFTIFYN PRASPTEFVI PFAKYQKAVY GNQLSLGMRF RMMFETEELG TRRYMGTITG  240
INDLDPVRWK NSQWRNLQVG WDESAAGERR NRVSIWEIEP VAAPFFICPP PFFGAKRPRQ  300
LDDESSEMEN LLKRAMPWLG EEICIKDPQT QNTIMPGLSL VQWMNMNMQQ SSSFANTAMQ  360
SEYLRSITNP SMQNIGSGDL SRQLCLQNQL LQQNNMQFNT PKLPQQMQPN NELSKAALPL  420
NQNGASIKPE EQTQDTSNFQ RQQQSMNYTL PLSQAQTSLA QAQVLIQSQM QQQQQQQQQP  480
HISQNQLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.11e-154ARF family protein