PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG058040.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1135aa MW: 126715 Da PI: 6.512

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG058040.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.1	7e-23	133	234	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + TRIDC7AG058040.6 133 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 221 99***************************954.4444.48********************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++++l+++++r+ TRIDC7AG058040.6 222 DERQQLLLGIRRA 234 577788*9997 PP
2	Auxin_resp	117.8	9.2e-39	259	342	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+ +rr++Gt++g++dldpvrW+nS+Wr+L+ TRIDC7AG058040.6 259 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 342 79********************************9*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1135 aa Download sequence
KNKLLDLGGW LLAGAGEPWE KKAPAINSDL WHACAGPLVQ LPPAGSLVVY FPQGHSEQVA 60 ASMQKDVDAH VPNYPNLPSK LICLLHNITL HADLETDEVY AQMTLQPVTS YGKEALQLSE 120 LALKQARPQN EFFCKTLTAS DTSTHGGFSV PRRAAEKIFP PLDFSMQPPA QEIQARDLHD 180 NVWTFRHIYR GQPKRHLLTT GWSLFVSGKR LFAGDSVIFV RDERQQLLLG IRRANRQPTN 240 ISSSVLSSDS MHIGILAAAA HAAANNSPFT IFYNPRASPT EFVIPFAKYQ KAVYGNQLSL 300 GMRFRMMFET EELGTRRYMG TITGINDLDP VRWKNSQWRN LQVGWDESAA GERRNRVSIW 360 EIEPVAAPFF ICPPPFFGAK RPRQLDDESS EMENLLKRAM PWLGEEICIK DPQTQNTIMP 420 GLSLVQWMNM NMQQSSSFAN TAMQSEYLRS ITNPSMQNIG SGDLSRQLCL QNQLLQQNNM 480 QFNTPKLPQQ MQPNNELSKA ALPLNQNGAS IKPEEQTQDT SNFQRQQQSM NYTLPLSQAQ 540 TSLAQAQVLI QSQMQQQQQQ QHQQHQHQQQ EQQHQQQQQQ KFLQQQQLLL QQQQLQQHQH 600 QLQQQQQQQL GKMPAQLPNL SNQQLQLSDQ QLQLQLLQKL QQQQQSLLSQ PGVTLAQLPL 660 IQEQQKLLMD MQQQLSSSHS LSQQQMMPQQ STKIPSQAAS LPPPMQPDTT HQKLPQKQAL 720 PADTLEAAIP TTTSHKFSSA NGSPLRMPGA THSVVTEEIP SCSTSPSTAN GNHLLQPVPG 780 RDQYSSMINT EKAPHSTAPM SVPSSLDAVT GAQRMTKELP KLNSNVKQNM MPSKLLNGGA 840 GPQNFANNAA PTDYLETASS ATSVWLSQAD GLLHPNFPMT NFSQQQLFKD APPDTEIPAE 900 IPSNNALFGI SNDGHVGFPM VTDDFLTNGI DAVKYENHIS TDIDNNYRIP KDAQQEISSS 960 MVSQSFGASD MAFNSIDSGI NDGAFLNKSS WPPAPPVKRM RTFTKVYKRG AVGRSIDISQ 1020 YAGYEELKHA LARMFSIEGQ LEERQRIGWK LVYRDHEDDI LLLGDDPWEE FVNCVKCIRI 1080 LSPQEVQQMS LDGDLGSSVV PNQACSSSEG GGNAWRARCD QNSGNPSTGS YDQFE

Sequence ? help Back to Top

Protein Sequence Length: 1135 aa Download sequence

KNKLLDLGGW LLAGAGEPWE KKAPAINSDL WHACAGPLVQ LPPAGSLVVY FPQGHSEQVA  60
ASMQKDVDAH VPNYPNLPSK LICLLHNITL HADLETDEVY AQMTLQPVTS YGKEALQLSE  120
LALKQARPQN EFFCKTLTAS DTSTHGGFSV PRRAAEKIFP PLDFSMQPPA QEIQARDLHD  180
NVWTFRHIYR GQPKRHLLTT GWSLFVSGKR LFAGDSVIFV RDERQQLLLG IRRANRQPTN  240
ISSSVLSSDS MHIGILAAAA HAAANNSPFT IFYNPRASPT EFVIPFAKYQ KAVYGNQLSL  300
GMRFRMMFET EELGTRRYMG TITGINDLDP VRWKNSQWRN LQVGWDESAA GERRNRVSIW  360
EIEPVAAPFF ICPPPFFGAK RPRQLDDESS EMENLLKRAM PWLGEEICIK DPQTQNTIMP  420
GLSLVQWMNM NMQQSSSFAN TAMQSEYLRS ITNPSMQNIG SGDLSRQLCL QNQLLQQNNM  480
QFNTPKLPQQ MQPNNELSKA ALPLNQNGAS IKPEEQTQDT SNFQRQQQSM NYTLPLSQAQ  540
TSLAQAQVLI QSQMQQQQQQ QHQQHQHQQQ EQQHQQQQQQ KFLQQQQLLL QQQQLQQHQH  600
QLQQQQQQQL GKMPAQLPNL SNQQLQLSDQ QLQLQLLQKL QQQQQSLLSQ PGVTLAQLPL  660
IQEQQKLLMD MQQQLSSSHS LSQQQMMPQQ STKIPSQAAS LPPPMQPDTT HQKLPQKQAL  720
PADTLEAAIP TTTSHKFSSA NGSPLRMPGA THSVVTEEIP SCSTSPSTAN GNHLLQPVPG  780
RDQYSSMINT EKAPHSTAPM SVPSSLDAVT GAQRMTKELP KLNSNVKQNM MPSKLLNGGA  840
GPQNFANNAA PTDYLETASS ATSVWLSQAD GLLHPNFPMT NFSQQQLFKD APPDTEIPAE  900
IPSNNALFGI SNDGHVGFPM VTDDFLTNGI DAVKYENHIS TDIDNNYRIP KDAQQEISSS  960
MVSQSFGASD MAFNSIDSGI NDGAFLNKSS WPPAPPVKRM RTFTKVYKRG AVGRSIDISQ  1020
YAGYEELKHA LARMFSIEGQ LEERQRIGWK LVYRDHEDDI LLLGDDPWEE FVNCVKCIRI  1080
LSPQEVQQMS LDGDLGSSVV PNQACSSSEG GGNAWRARCD QNSGNPSTGS YDQFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG058040.6