PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG058040.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1140aa MW: 127197 Da PI: 6.642

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG058040.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.1	7e-23	134	235	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + TRIDC7AG058040.5 134 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 222 99***************************954.4444.48********************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++++l+++++r+ TRIDC7AG058040.5 223 DERQQLLLGIRRA 235 577788*9997 PP
2	Auxin_resp	117.8	9.3e-39	260	343	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+ +rr++Gt++g++dldpvrW+nS+Wr+L+ TRIDC7AG058040.5 260 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 343 79********************************9*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1140 aa Download sequence
TLAAGCSPAP ESHRRCCCAG EKKAPAINSD LWHACAGPLV QLPPAGSLVV YFPQGHSEQV 60 AASMQKDVDA HVPNYPNLPS KLICLLHNIT LHADLETDEV YAQMTLQPVT SYGKEALQLS 120 ELALKQARPQ NEFFCKTLTA SDTSTHGGFS VPRRAAEKIF PPLDFSMQPP AQEIQARDLH 180 DNVWTFRHIY RGQPKRHLLT TGWSLFVSGK RLFAGDSVIF VRDERQQLLL GIRRANRQPT 240 NISSSVLSSD SMHIGILAAA AHAAANNSPF TIFYNPRASP TEFVIPFAKY QKAVYGNQLS 300 LGMRFRMMFE TEELGTRRYM GTITGINDLD PVRWKNSQWR NLQVGWDESA AGERRNRVSI 360 WEIEPVAAPF FICPPPFFGA KRPRQLDDES SEMENLLKRA MPWLGEEICI KDPQTQNTIM 420 PGLSLVQWMN MNMQQSSSFA NTAMQSEYLR SITNPSMQNI GSGDLSRQLC LQNQLLQQNN 480 MQFNTPKLPQ QMQPNNELSK AALPLNQNGA SIKPEEQTQD TSNFQRQQQS MNYTLPLSQA 540 QTSLAQAQVL IQSQMQQQQQ QQQQHHHQQH QHQQQEQQHQ QQQQQKFLQQ QQLLLQQQQL 600 QQHQHQLQQQ QQQQLGKMPA QLPNLSNQQL QLSDQQLQLQ LLQKLQQQQQ SLLSQPGVTL 660 AQLPLIQEQQ KLLMDMQQQL SSSHSLSQQQ MMPQQSTKIP SQAASLPPPM QPDTTHQKLP 720 QKQALPADTL EAAIPTTTSH KFSSANGSPL RMPGATHSVV TEEIPSCSTS PSTANGNHLL 780 QPVPGRDQYS SMINTEKAPH STAPMSVPSS LDAVTGAQRM TKELPKLNSN VKQNMMPSKL 840 LNGGAGPQNF ANNAAPTDYL ETASSATSVW LSQADGLLHP NFPMTNFSQQ QLFKDAPPDT 900 EIPAEIPSNN ALFGISNDGH VGFPMVTDDF LTNGIDAVKY ENHISTDIDN NYRIPKDAQQ 960 EISSSMVSQS FGASDMAFNS IDSGINDGAF LNKSSWPPAP PVKRMRTFTK VYKRGAVGRS 1020 IDISQYAGYE ELKHALARMF SIEGQLEERQ RIGWKLVYRD HEDDILLLGD DPWEEFVNCV 1080 KCIRILSPQE VQQMSLDGDL GSSVVPNQAC SSSEGGGNAW RARCDQNSGN PSTGSYDQFE

Sequence ? help Back to Top

Protein Sequence Length: 1140 aa Download sequence

TLAAGCSPAP ESHRRCCCAG EKKAPAINSD LWHACAGPLV QLPPAGSLVV YFPQGHSEQV  60
AASMQKDVDA HVPNYPNLPS KLICLLHNIT LHADLETDEV YAQMTLQPVT SYGKEALQLS  120
ELALKQARPQ NEFFCKTLTA SDTSTHGGFS VPRRAAEKIF PPLDFSMQPP AQEIQARDLH  180
DNVWTFRHIY RGQPKRHLLT TGWSLFVSGK RLFAGDSVIF VRDERQQLLL GIRRANRQPT  240
NISSSVLSSD SMHIGILAAA AHAAANNSPF TIFYNPRASP TEFVIPFAKY QKAVYGNQLS  300
LGMRFRMMFE TEELGTRRYM GTITGINDLD PVRWKNSQWR NLQVGWDESA AGERRNRVSI  360
WEIEPVAAPF FICPPPFFGA KRPRQLDDES SEMENLLKRA MPWLGEEICI KDPQTQNTIM  420
PGLSLVQWMN MNMQQSSSFA NTAMQSEYLR SITNPSMQNI GSGDLSRQLC LQNQLLQQNN  480
MQFNTPKLPQ QMQPNNELSK AALPLNQNGA SIKPEEQTQD TSNFQRQQQS MNYTLPLSQA  540
QTSLAQAQVL IQSQMQQQQQ QQQQHHHQQH QHQQQEQQHQ QQQQQKFLQQ QQLLLQQQQL  600
QQHQHQLQQQ QQQQLGKMPA QLPNLSNQQL QLSDQQLQLQ LLQKLQQQQQ SLLSQPGVTL  660
AQLPLIQEQQ KLLMDMQQQL SSSHSLSQQQ MMPQQSTKIP SQAASLPPPM QPDTTHQKLP  720
QKQALPADTL EAAIPTTTSH KFSSANGSPL RMPGATHSVV TEEIPSCSTS PSTANGNHLL  780
QPVPGRDQYS SMINTEKAPH STAPMSVPSS LDAVTGAQRM TKELPKLNSN VKQNMMPSKL  840
LNGGAGPQNF ANNAAPTDYL ETASSATSVW LSQADGLLHP NFPMTNFSQQ QLFKDAPPDT  900
EIPAEIPSNN ALFGISNDGH VGFPMVTDDF LTNGIDAVKY ENHISTDIDN NYRIPKDAQQ  960
EISSSMVSQS FGASDMAFNS IDSGINDGAF LNKSSWPPAP PVKRMRTFTK VYKRGAVGRS  1020
IDISQYAGYE ELKHALARMF SIEGQLEERQ RIGWKLVYRD HEDDILLLGD DPWEEFVNCV  1080
KCIRILSPQE VQQMSLDGDL GSSVVPNQAC SSSEGGGNAW RARCDQNSGN PSTGSYDQFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG058040.5