PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG058040.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1128aa MW: 125941 Da PI: 6.6213

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG058040.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.1	6.9e-23	122	223	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + TRIDC7AG058040.4 122 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 210 99***************************954.4444.48********************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++++l+++++r+ TRIDC7AG058040.4 211 DERQQLLLGIRRA 223 577788*9997 PP
2	Auxin_resp	117.8	9.1e-39	248	331	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+ +rr++Gt++g++dldpvrW+nS+Wr+L+ TRIDC7AG058040.4 248 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 331 79********************************9*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1128 aa Download sequence
MAATGAGREK KAPAINSDLW HACAGPLVQL PPAGSLVVYF PQGHSEQVAA SMQKDVDAHV 60 PNYPNLPSKL ICLLHNITLH ADLETDEVYA QMTLQPVTSY GKEALQLSEL ALKQARPQNE 120 FFCKTLTASD TSTHGGFSVP RRAAEKIFPP LDFSMQPPAQ EIQARDLHDN VWTFRHIYRG 180 QPKRHLLTTG WSLFVSGKRL FAGDSVIFVR DERQQLLLGI RRANRQPTNI SSSVLSSDSM 240 HIGILAAAAH AAANNSPFTI FYNPRASPTE FVIPFAKYQK AVYGNQLSLG MRFRMMFETE 300 ELGTRRYMGT ITGINDLDPV RWKNSQWRNL QVGWDESAAG ERRNRVSIWE IEPVAAPFFI 360 CPPPFFGAKR PRQLDDESSE MENLLKRAMP WLGEEICIKD PQTQNTIMPG LSLVQWMNMN 420 MQQSSSFANT AMQSEYLRSI TNPSMQNIGS GDLSRQLCLQ NQLLQQNNMQ FNTPKLPQQM 480 QPNNELSKAA LPLNQNGASI KPEEQTQDTS NFQRQQQSMN YTLPLSQAQT SLAQAQVLIQ 540 SQMQQQQQQQ QQHHHQQHQH QQQEQQHQQQ QQQKFLQQQQ LLLQQQQLQQ HQHQLQQQQQ 600 QQLGKMPAQL PNLSNQQLQL SDQQLQLQLL QKLQQQQQSL LSQPGVTLAQ LPLIQEQQKL 660 LMDMQQQLSS SHSLSQQQMM PQQSTKIPSQ AASLPPPMQP DTTHQKLPQK QALPADTLEA 720 AIPTTTSHKF SSANGSPLRM PGATHSVVTE EIPSCSTSPS TANGNHLLQP VPGRDQYSSM 780 INTEKAPHST APMSVPSSLD AVTGAQRMTK ELPKLNSNVK QNMMPSKLLN GGAGPQNFAN 840 NAAPTDYLET ASSATSVWLS QADGLLHPNF PMTNFSQQQL FKDAPPDTEI PAEIPSNNAL 900 FGISNDGHVG FPMVTDDFLT NGIDAVKYEN HISTDIDNNY RIPKDAQQEI SSSMVSQSFG 960 ASDMAFNSID SGINDGAFLN KSSWPPAPPV KRMRTFTKVY KRGAVGRSID ISQYAGYEEL 1020 KHALARMFSI EGQLEERQRI GWKLVYRDHE DDILLLGDDP WEEFVNCVKC IRILSPQEVQ 1080 QMSLDGDLGS SVVPNQACSS SEGGGNAWRA RCDQNSGNPS TGSYDQFE

Sequence ? help Back to Top

Protein Sequence Length: 1128 aa Download sequence

MAATGAGREK KAPAINSDLW HACAGPLVQL PPAGSLVVYF PQGHSEQVAA SMQKDVDAHV  60
PNYPNLPSKL ICLLHNITLH ADLETDEVYA QMTLQPVTSY GKEALQLSEL ALKQARPQNE  120
FFCKTLTASD TSTHGGFSVP RRAAEKIFPP LDFSMQPPAQ EIQARDLHDN VWTFRHIYRG  180
QPKRHLLTTG WSLFVSGKRL FAGDSVIFVR DERQQLLLGI RRANRQPTNI SSSVLSSDSM  240
HIGILAAAAH AAANNSPFTI FYNPRASPTE FVIPFAKYQK AVYGNQLSLG MRFRMMFETE  300
ELGTRRYMGT ITGINDLDPV RWKNSQWRNL QVGWDESAAG ERRNRVSIWE IEPVAAPFFI  360
CPPPFFGAKR PRQLDDESSE MENLLKRAMP WLGEEICIKD PQTQNTIMPG LSLVQWMNMN  420
MQQSSSFANT AMQSEYLRSI TNPSMQNIGS GDLSRQLCLQ NQLLQQNNMQ FNTPKLPQQM  480
QPNNELSKAA LPLNQNGASI KPEEQTQDTS NFQRQQQSMN YTLPLSQAQT SLAQAQVLIQ  540
SQMQQQQQQQ QQHHHQQHQH QQQEQQHQQQ QQQKFLQQQQ LLLQQQQLQQ HQHQLQQQQQ  600
QQLGKMPAQL PNLSNQQLQL SDQQLQLQLL QKLQQQQQSL LSQPGVTLAQ LPLIQEQQKL  660
LMDMQQQLSS SHSLSQQQMM PQQSTKIPSQ AASLPPPMQP DTTHQKLPQK QALPADTLEA  720
AIPTTTSHKF SSANGSPLRM PGATHSVVTE EIPSCSTSPS TANGNHLLQP VPGRDQYSSM  780
INTEKAPHST APMSVPSSLD AVTGAQRMTK ELPKLNSNVK QNMMPSKLLN GGAGPQNFAN  840
NAAPTDYLET ASSATSVWLS QADGLLHPNF PMTNFSQQQL FKDAPPDTEI PAEIPSNNAL  900
FGISNDGHVG FPMVTDDFLT NGIDAVKYEN HISTDIDNNY RIPKDAQQEI SSSMVSQSFG  960
ASDMAFNSID SGINDGAFLN KSSWPPAPPV KRMRTFTKVY KRGAVGRSID ISQYAGYEEL  1020
KHALARMFSI EGQLEERQRI GWKLVYRDHE DDILLLGDDP WEEFVNCVKC IRILSPQEVQ  1080
QMSLDGDLGS SVVPNQACSS SEGGGNAWRA RCDQNSGNPS TGSYDQFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG058040.4