PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG058040.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 1131aa MW: 126334 Da PI: 6.6448 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 72.1 | 6.9e-23 | 122 | 223 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + TRIDC7AG058040.3 122 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 210 99*****************************954.4444.48************************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++++l+++++r+ TRIDC7AG058040.3 211 DERQQLLLGIRRA 223 577788***9997 PP | |||||||
2 | Auxin_resp | 117.8 | 9.2e-39 | 248 | 331 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+ +rr++Gt++g++dldpvrW+nS+Wr+L+ TRIDC7AG058040.3 248 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 331 79**********************************9*********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1131 aa Download sequence |
MAATGAGREK KAPAINSDLW HACAGPLVQL PPAGSLVVYF PQGHSEQVAA SMQKDVDAHV 60 PNYPNLPSKL ICLLHNITLH ADLETDEVYA QMTLQPVTSY GKEALQLSEL ALKQARPQNE 120 FFCKTLTASD TSTHGGFSVP RRAAEKIFPP LDFSMQPPAQ EIQARDLHDN VWTFRHIYRG 180 QPKRHLLTTG WSLFVSGKRL FAGDSVIFVR DERQQLLLGI RRANRQPTNI SSSVLSSDSM 240 HIGILAAAAH AAANNSPFTI FYNPRASPTE FVIPFAKYQK AVYGNQLSLG MRFRMMFETE 300 ELGTRRYMGT ITGINDLDPV RWKNSQWRNL QVGWDESAAG ERRNRVSIWE IEPVAAPFFI 360 CPPPFFGAKR PRQLDDESSE MENLLKRAMP WLGEEICIKD PQTQNTIMPG LSLVQWMNMN 420 MQQSSSFANT AMQSEYLRSI TNPSMQNIGS GDLSRQLCLQ NQLLQQNNMQ FNTPKLPQQM 480 QPNNELSKAA LPLNQNGASI KPEEQTQDTS NFQRQQQSMN YTLPLSQAQT SLAQAQVLIQ 540 SQMQQQQQQQ HQQQQHHHQQ HQHQQQEQQH QQQQQQKFLQ QQQLLLQQQQ LQQHQHQLQQ 600 QQQQQLGKMP AQLPNLSNQQ LQLSDQQLQL QLLQKLQQQQ QSLLSQPGVT LAQLPLIQEQ 660 QKLLMDMQQQ LSSSHSLSQQ QMMPQQSTKI PSQAASLPPP MQPDTTHQKL PQKQALPADT 720 LEAAIPTTTS HKFSSANGSP LRMPGATHSV VTEEIPSCST SPSTANGNHL LQPVPGRDQY 780 SSMINTEKAP HSTAPMSVPS SLDAVTGAQR MTKELPKLNS NVKQNMMPSK LLNGGAGPQN 840 FANNAAPTDY LETASSATSV WLSQADGLLH PNFPMTNFSQ QQLFKDAPPD TEIPAEIPSN 900 NALFGISNDG HVGFPMVTDD FLTNGIDAVK YENHISTDID NNYRIPKDAQ QEISSSMVSQ 960 SFGASDMAFN SIDSGINDGA FLNKSSWPPA PPVKRMRTFT KVYKRGAVGR SIDISQYAGY 1020 EELKHALARM FSIEGQLEER QRIGWKLVYR DHEDDILLLG DDPWEEFVNC VKCIRILSPQ 1080 EVQQMSLDGD LGSSVVPNQA CSSSEGGGNA WRARCDQNSG NPSTGSYDQF E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19220.1 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG058040.3 |