PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG058040.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 395aa MW: 45068.1 Da PI: 9.3691

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG058040.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.7	7.7e-17	6	69	34	99
SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++++l+++++r+ TRIDC7AG058040.12 6 QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--RDERQQLLLGIRRA 69 4899********************************************..4577888*9997 PP
2	Auxin_resp	119.9	2e-39	94	177	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+ +rr++Gt++g++dldpvrW+nS+Wr+L+ TRIDC7AG058040.12 94 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 177 79********************************9*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MQPPAQEIQA RDLHDNVWTF RHIYRGQPKR HLLTTGWSLF VSGKRLFAGD SVIFVRDERQ 60 QLLLGIRRAN RQPTNISSSV LSSDSMHIGI LAAAAHAAAN NSPFTIFYNP RASPTEFVIP 120 FAKYQKAVYG NQLSLGMRFR MMFETEELGT RRYMGTITGI NDLDPVRWKN SQWRNLQVGW 180 DESAAGERRN RVSIWEIEPV AAPFFICPPP FFGAKRPRQL DDESSEMENL LKRAMPWLGE 240 EICIKDPQTQ NTIMPGLSLV QWMNMNMQQS SSFANTAMQS EYLRSITNPS MQNIGSGDLS 300 RQLCLQNQLL QQNNMQFNTP KLPQQMQPNN ELSKAALPLN QNGASIKPEE QTQDTSNFQR 360 QQQSMNYTLP LSQAQTSLAQ AQVLIQSQMQ QQQQQ

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MQPPAQEIQA RDLHDNVWTF RHIYRGQPKR HLLTTGWSLF VSGKRLFAGD SVIFVRDERQ  60
QLLLGIRRAN RQPTNISSSV LSSDSMHIGI LAAAAHAAAN NSPFTIFYNP RASPTEFVIP  120
FAKYQKAVYG NQLSLGMRFR MMFETEELGT RRYMGTITGI NDLDPVRWKN SQWRNLQVGW  180
DESAAGERRN RVSIWEIEPV AAPFFICPPP FFGAKRPRQL DDESSEMENL LKRAMPWLGE  240
EICIKDPQTQ NTIMPGLSLV QWMNMNMQQS SSFANTAMQS EYLRSITNPS MQNIGSGDLS  300
RQLCLQNQLL QQNNMQFNTP KLPQQMQPNN ELSKAALPLN QNGASIKPEE QTQDTSNFQR  360
QQQSMNYTLP LSQAQTSLAQ AQVLIQSQMQ QQQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	1e-122	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG058040.12