PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG058040.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 467aa MW: 53027.1 Da PI: 9.3321

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG058040.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.9	1.9e-23	33	134	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F TRIDC7AG058040.11 33 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV-- 120 99***************************954.4444.48********************************************.. PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 ++++++l+++++r+ TRIDC7AG058040.11 121 RDERQQLLLGIRRA 134 4577888*9997 PP
2	Auxin_resp	112.6	3.7e-37	159	243	1	83
Auxin_resp 1 aahaastksvFevvYnP.rastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnP ras++eFv++++k++ka++ +++s+GmRf+m+fete+ +rr++Gt++g++dldpvrW+nS+Wr+L+ TRIDC7AG058040.11 159 AAHAAANNSPFTIFYNPsRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 243 79*************77999***********9*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
AQMTLQPVTS YGKEALQLSE LALKQARPQN EFFCKTLTAS DTSTHGGFSV PRRAAEKIFP 60 PLDFSMQPPA QEIQARDLHD NVWTFRHIYR GQPKRHLLTT GWSLFVSGKR LFAGDSVIFV 120 RDERQQLLLG IRRANRQPTN ISSSVLSSDS MHIGILAAAA HAAANNSPFT IFYNPSRASP 180 TEFVIPFAKY QKAVYGNQLS LGMRFRMMFE TEELGTRRYM GTITGINDLD PVRWKNSQWR 240 NLQVGWDESA AGERRNRVSI WEIEPVAAPF FICPPPFFGA KRPRQLDDES SEMENLLKRA 300 MPWLGEEICI KDPQTQNTIM PGLSLVQWMN MNMQQSSSFA NTAMQSEYLR SITNPSMQNI 360 GSGDLSRQLC LQNQLLQQNN MQFNTPKLPQ QMQPNNELSK AALPLNQNGA SIKPEEQTQD 420 TSNFQRQQQS MNYTLPLSQA QTSLAQAQVL IQSQMQQQQQ QQQQPHI

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

AQMTLQPVTS YGKEALQLSE LALKQARPQN EFFCKTLTAS DTSTHGGFSV PRRAAEKIFP  60
PLDFSMQPPA QEIQARDLHD NVWTFRHIYR GQPKRHLLTT GWSLFVSGKR LFAGDSVIFV  120
RDERQQLLLG IRRANRQPTN ISSSVLSSDS MHIGILAAAA HAAANNSPFT IFYNPSRASP  180
TEFVIPFAKY QKAVYGNQLS LGMRFRMMFE TEELGTRRYM GTITGINDLD PVRWKNSQWR  240
NLQVGWDESA AGERRNRVSI WEIEPVAAPF FICPPPFFGA KRPRQLDDES SEMENLLKRA  300
MPWLGEEICI KDPQTQNTIM PGLSLVQWMN MNMQQSSSFA NTAMQSEYLR SITNPSMQNI  360
GSGDLSRQLC LQNQLLQQNN MQFNTPKLPQ QMQPNNELSK AALPLNQNGA SIKPEEQTQD  420
TSNFQRQQQS MNYTLPLSQA QTSLAQAQVL IQSQMQQQQQ QQQQPHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	1e-159	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG058040.11