PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG058040.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 534aa MW: 60430.5 Da PI: 7.9493

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG058040.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.6	2.3e-23	96	197	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F TRIDC7AG058040.10 96 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV-- 183 99***************************954.4444.48********************************************.. PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 ++++++l+++++r+ TRIDC7AG058040.10 184 RDERQQLLLGIRRA 197 4577888*9997 PP
2	Auxin_resp	119.2	3.3e-39	222	305	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+ +rr++Gt++g++dldpvrW+nS+Wr+L+ TRIDC7AG058040.10 222 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 305 79********************************9*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
LVQLPPAGSL VVYFPQGHSE QVAASMQKDV DAHVPNYPNL PSKLICLLHN ITLHADLETD 60 EVYAQMTLQP VTSYGKEALQ LSELALKQAR PQNEFFCKTL TASDTSTHGG FSVPRRAAEK 120 IFPPLDFSMQ PPAQEIQARD LHDNVWTFRH IYRGQPKRHL LTTGWSLFVS GKRLFAGDSV 180 IFVRDERQQL LLGIRRANRQ PTNISSSVLS SDSMHIGILA AAAHAAANNS PFTIFYNPRA 240 SPTEFVIPFA KYQKAVYGNQ LSLGMRFRMM FETEELGTRR YMGTITGIND LDPVRWKNSQ 300 WRNLQVGWDE SAAGERRNRV SIWEIEPVAA PFFICPPPFF GAKRPRQLDD ESSEMENLLK 360 RAMPWLGEEI CIKDPQTQNT IMPGLSLVQW MNMNMQQSSS FANTAMQSEY LRSITNPSMQ 420 NIGSGDLSRQ LCLQNQLLQQ NNMQFNTPKL PQQMQPNNEL SKAALPLNQN GASIKPEEQT 480 QDTSNFQRQQ QSMNYTLPLS QAQTSLAQAQ VLIQSQMQQQ QQQQQQPHIS QNQL

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

LVQLPPAGSL VVYFPQGHSE QVAASMQKDV DAHVPNYPNL PSKLICLLHN ITLHADLETD  60
EVYAQMTLQP VTSYGKEALQ LSELALKQAR PQNEFFCKTL TASDTSTHGG FSVPRRAAEK  120
IFPPLDFSMQ PPAQEIQARD LHDNVWTFRH IYRGQPKRHL LTTGWSLFVS GKRLFAGDSV  180
IFVRDERQQL LLGIRRANRQ PTNISSSVLS SDSMHIGILA AAAHAAANNS PFTIFYNPRA  240
SPTEFVIPFA KYQKAVYGNQ LSLGMRFRMM FETEELGTRR YMGTITGIND LDPVRWKNSQ  300
WRNLQVGWDE SAAGERRNRV SIWEIEPVAA PFFICPPPFF GAKRPRQLDD ESSEMENLLK  360
RAMPWLGEEI CIKDPQTQNT IMPGLSLVQW MNMNMQQSSS FANTAMQSEY LRSITNPSMQ  420
NIGSGDLSRQ LCLQNQLLQQ NNMQFNTPKL PQQMQPNNEL SKAALPLNQN GASIKPEEQT  480
QDTSNFQRQQ QSMNYTLPLS QAQTSLAQAQ VLIQSQMQQQ QQQQQQPHIS QNQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG058040.10