PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG057330.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 488aa MW: 53793.9 Da PI: 4.5312

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG057330.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	55	1.8e-17	68	120	3	55
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQkYRl 55 r W++eLHe+F++ave LG + At +i + m+ k+ Lt++hv+SHLQk+Rl TRIDC7AG057330.5 68 RFTWSSELHEKFLQAVEVLG-A-SATAGKIHQYMNAKDlnLTRQHVASHLQKHRL 120 899**************5.4.48999****973369**********8 PP
2	Myb_DNA-binding	35.7	2e-11	70	119	3	48
SS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.tWktIartmg...kgRtlkqcksrwqkyl 48 W+ e++e++++av+ lG t +I ++m+ +++t+ ++ s++qk++ TRIDC7AG057330.5 70 TWSSELHEKFLQAVEVLGASaTAGKIHQYMNakdLNLTRQHVASHLQKHR 119 6***************99**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MCAYDEAVSA RMTLGTCFNV VKPLDTETIN VLRMRALQHR SIKNHKSETE DEEQDALDAN 60 VYSDNLGRFT WSSELHEKFL QAVEVLGASA TAGKIHQYMN AKDLNLTRQH VASHLQKHRL 120 RAQRLSQGYQ HYASMKELSE MISSSYKLAS AKPNNYLATT QTQFTHGVAS SIWDKYPGIV 180 WPHVEGSSAA SAMWYKYPGK PWGQVGESSA RAEVSQINAG PPSVLIHGTK SIWDRYEESL 240 QYYNGSPANK CEVLPVKSKT LDVYGCNIFI NLERGETSRT EAAGKIVIGL ESDDMHEGSM 300 DNVHAAVTPQ KDTMEKVRAA VTPQKDAMDE VHAAAIPHGV KEVPAAAMGA GDLMDLGSEA 360 LLDGMDNYHP SAENAQSEPF SDSDWDELEK FWMNQMEGQG QEQQGLVPLD LLLVDGIAPD 420 ELLQEDEAWN QALQPANPAN VVNNTPIAEE PATGDALVYD LANQSGVADN VFWVWSPQFA 480 GDDYGMPF

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MCAYDEAVSA RMTLGTCFNV VKPLDTETIN VLRMRALQHR SIKNHKSETE DEEQDALDAN  60
VYSDNLGRFT WSSELHEKFL QAVEVLGASA TAGKIHQYMN AKDLNLTRQH VASHLQKHRL  120
RAQRLSQGYQ HYASMKELSE MISSSYKLAS AKPNNYLATT QTQFTHGVAS SIWDKYPGIV  180
WPHVEGSSAA SAMWYKYPGK PWGQVGESSA RAEVSQINAG PPSVLIHGTK SIWDRYEESL  240
QYYNGSPANK CEVLPVKSKT LDVYGCNIFI NLERGETSRT EAAGKIVIGL ESDDMHEGSM  300
DNVHAAVTPQ KDTMEKVRAA VTPQKDAMDE VHAAAIPHGV KEVPAAAMGA GDLMDLGSEA  360
LLDGMDNYHP SAENAQSEPF SDSDWDELEK FWMNQMEGQG QEQQGLVPLD LLLVDGIAPD  420
ELLQEDEAWN QALQPANPAN VVNNTPIAEE PATGDALVYD LANQSGVADN VFWVWSPQFA  480
GDDYGMPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	1e-10	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG057330.5