PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG046170.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 428aa MW: 46907.7 Da PI: 8.3847

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG046170.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.8	4.5e-14	324	410	3	87
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 k+lt+sdv + gr+vlpkk ae+ + ++ ++ l++ d +W++k+++ ++ks++y+l ++eFvk +gL++gD ++++ ++ TRIDC7AG046170.1 324 KELTKSDVANVGRIVLPKKDAEASlpPLCERDPVILQMDDmVLPITWKFKYRFwpNNKSRMYILD-STSEFVKTHGLQAGDALIIY--KN 410 899****************98888666666766777775555***99777777777777.9**************998..44 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
GEARKESKLY NCKTLPNSQG KERIDRREEV SDHHPSLPSP HSRAPASACL GYPTTPPPTH 60 SRGQRRERSQ GLAGRCASRG VCQRPRGMGG DGRPSDGGGG AGAGHPHLFQ YQALLAAVHT 120 QNPNHSHNLP FPLPPLNGPG PDASTHNAVR QPPTPRGFAD WSASTSAFTS LAVQSTPSTA 180 TANAYHYSLS PCYAFWTHYM LNKNAYSYYP APNQEHTHPF SLDNNQAKDP GSIPSFGIES 240 FNTTSLAPNM SAHMPPMEGP LPTKEPEAPE DMPARVATIK DEMDARNGVE LKCETVDALP 300 ELKQGHESCA SKFNSGEYQV ILRKELTKSD VANVGRIVLP KKDAEASLPP LCERDPVILQ 360 MDDMVLPITW KFKYRFWPNN KSRMYILDST SEFVKTHGLQ AGDALIIYKN PVPGKYIVRG 420 EKAIQQTN

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

GEARKESKLY NCKTLPNSQG KERIDRREEV SDHHPSLPSP HSRAPASACL GYPTTPPPTH  60
SRGQRRERSQ GLAGRCASRG VCQRPRGMGG DGRPSDGGGG AGAGHPHLFQ YQALLAAVHT  120
QNPNHSHNLP FPLPPLNGPG PDASTHNAVR QPPTPRGFAD WSASTSAFTS LAVQSTPSTA  180
TANAYHYSLS PCYAFWTHYM LNKNAYSYYP APNQEHTHPF SLDNNQAKDP GSIPSFGIES  240
FNTTSLAPNM SAHMPPMEGP LPTKEPEAPE DMPARVATIK DEMDARNGVE LKCETVDALP  300
ELKQGHESCA SKFNSGEYQV ILRKELTKSD VANVGRIVLP KKDAEASLPP LCERDPVILQ  360
MDDMVLPITW KFKYRFWPNN KSRMYILDST SEFVKTHGLQ AGDALIIYKN PVPGKYIVRG  420
EKAIQQTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	2e-33	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG046170.1