PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG042690.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 350aa    MW: 37642.6 Da    PI: 9.2854
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG042690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.37.1e-135296347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +W++eE+++++ + ++lG+g+W+ I+r     Rt+ q+ s+ qky
  TRIDC7AG042690.1 52 SWSEEEHKKFLLGLNKLGKGDWRGISRNYVVSRTPTQVASHAQKY 96
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
KLFGVRIGDK PIRKSVSMDN LAQLAEGSGG ARAEGYGSEG DDDKPHRKRG ESWSEEEHKK  60
FLLGLNKLGK GDWRGISRNY VVSRTPTQVA SHAQKYFIRQ TNVNRRKRRS SLFDMVIEDP  120
GDQPLSRSSS QEMPLSRSSS QDVEEFVDDL RPVTAPVTPP APMPVITSVS VPPPVPVMAP  180
PAPVPMLTYA SAPSPVLAMA HQPQGNESAG SSSIAGEAGM VMPQVMPPYG YPPPMMIPAP  240
HYVQAVFPYP YYGYAPMFYG PPVSMQASSP VTVQASHEPV RPVAVHSAPP VNVEDLYNMS  300
KLNLKGDSST SGVAPNLALP PNPNGRPERQ SAFHGKGAEN GSSNGLIPTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.18e-36MYB_related family protein