PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG042540.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 342aa MW: 36302.2 Da PI: 9.5875

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG042540.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46	1.3e-14	101	145	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ Ia+ + ++Rt+ q+ s+ qky TRIDC7AG042540.5 101 PWTEEEHRTFLAGLEKLGKGDWRGIAKNFVTTRTPTQVASHAQKY 145 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
AGMPQDSRPP GMRLFGVTIA PAPAPQLDPP DGDRDPSPNP PVAAREDVMR KCKSMGNLAA 60 LASACPSGDA GGAGDGYLSD GGLLQSSGKR RRAQERKKAV PWTEEEHRTF LAGLEKLGKG 120 DWRGIAKNFV TTRTPTQVAS HAQKYFLRQT NPNKKKRRSS LFDMMASDLS PAPNCPILPP 180 TMAKFHDMVT MTNQLQNSSL EGVSSSNAAN LAKQVTRDLP PPVPSFTATN VDGSLSKMNH 240 MDCFSRVPSL FRPIPIVPEG TPPSAPATAN TSALTFEANL TSCTSAFLIP QSGPSPLPPA 300 TAAKTDHAAE NKDLELTVGL PSQQNMTNNI SSRNAVGVIQ VV

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

AGMPQDSRPP GMRLFGVTIA PAPAPQLDPP DGDRDPSPNP PVAAREDVMR KCKSMGNLAA  60
LASACPSGDA GGAGDGYLSD GGLLQSSGKR RRAQERKKAV PWTEEEHRTF LAGLEKLGKG  120
DWRGIAKNFV TTRTPTQVAS HAQKYFLRQT NPNKKKRRSS LFDMMASDLS PAPNCPILPP  180
TMAKFHDMVT MTNQLQNSSL EGVSSSNAAN LAKQVTRDLP PPVPSFTATN VDGSLSKMNH  240
MDCFSRVPSL FRPIPIVPEG TPPSAPATAN TSALTFEANL TSCTSAFLIP QSGPSPLPPA  300
TAAKTDHAAE NKDLELTVGL PSQQNMTNNI SSRNAVGVIQ VV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	158	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47390.1	3e-37	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG042540.5