PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG042530.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 303aa    MW: 33173.3 Da    PI: 6.2916
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG042530.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.51.3e-172771147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rgr+++eE++l++ +++  G++ W+ Ia++++ gRt++++k++w+++
  TRIDC7AG042530.5 27 RGRFSPEEEKLIISLHAIVGNR-WAHIASHLP-GRTDNEIKNYWNSW 71
                      89********************.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
FFYVGLQRCG KSCRLRWINY LRPDIRRGRF SPEEEKLIIS LHAIVGNRWA HIASHLPGRT  60
DNEIKNYWNS WIKKKIRKAP AVPNVTTTSS TTSTSPPNNG LAPCSGSTAT SDVHHRRLQH  120
PTFSCAPAGD HLQLDAIIGH HQSTSLALPV AAGAGQDSPP GMSHHCPLFM FDTSVVSTPF  180
ASAAAQQHPF IASFTAAMAE ADTPSCYHLP PLVDGMGAMG MCMEAMDDHC GAGAGMGNGC  240
FGDEQRQRRR PGLEEEEGEQ LGQHEQWDEE QLLMWDDQEV LTPSNMEAMQ SGEHSLLFMG  300
PNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63910.11e-48MYB family protein