PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG041730.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 717aa MW: 77813.4 Da PI: 6.7582

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG041730.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.8	3.2e-15	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+ E++++++a k++G W +I +++g ++t+ q++s+ qk+ TRIDC7AG041730.3 24 RERWTEAEHKRFLEALKLYGRA-WQRIEEHVG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 717 aa Download sequence
MEINSSGEET VIKVRKPYTI TKQRERWTEA EHKRFLEALK LYGRAWQRIE EHVGTKTAVQ 60 IRSHAQKFFT KLEKEAINNG TSPGQAHDID IPPPRPKRKP NCPYPRKGCL SSETPTREVP 120 KSSVSLSNSN AEMASNGTLQ LTCIRKLQRK ELSENGSCSE VINIFREAPS ASFSSSNKSS 180 SNHGVSGGIE PTKTENKDIA TMERKSTSID VGKDVKDIND QEMERNNRVH ISSNYDGSHE 240 DCLDNSMKHM QLKPNTVETT YTGQHAASAP LYQMNKTGAT GAPDPGTEGS HPDQTSDRVG 300 GANGSMDCIH PTLPVDPKIG SSSTAQSFPH NYAGFAPTMQ CHCNQDAYRS SLNMSSTFSN 360 MLVSTLLSNP TVHAAARLAA SYWPAADSNI PVGPNQEVFA ENAQGRHIGS PPSMASVVAA 420 TVAAASAWWA TQGLLPLFAP PMAFPFVPVP TASFPTTDVQ RATENCPVDN APKECQVAQE 480 QGQPEAMIVV ASSGSDKSGK GEVSPHTELN ISPADKVETT PPTGAETSDA FGNKKKQDRS 540 SCGSNTPSSS DVEAEHVPEN QDQANDKTQQ ACCSNSSAGD MNHRRFRNIS STNDSWKEVS 600 EEGRMAFDKL FSRGKLPQSF SPPQAEGLKV VPRGEQDEAT TVTVDLNKSA AVMDHELDTL 660 VGPRATFPIE LSHLNMKSRR TGFKPYKRCS VEAKENRVPA ADEVGTKRIR LDSEPST

Sequence ? help Back to Top

Protein Sequence Length: 717 aa Download sequence

MEINSSGEET VIKVRKPYTI TKQRERWTEA EHKRFLEALK LYGRAWQRIE EHVGTKTAVQ  60
IRSHAQKFFT KLEKEAINNG TSPGQAHDID IPPPRPKRKP NCPYPRKGCL SSETPTREVP  120
KSSVSLSNSN AEMASNGTLQ LTCIRKLQRK ELSENGSCSE VINIFREAPS ASFSSSNKSS  180
SNHGVSGGIE PTKTENKDIA TMERKSTSID VGKDVKDIND QEMERNNRVH ISSNYDGSHE  240
DCLDNSMKHM QLKPNTVETT YTGQHAASAP LYQMNKTGAT GAPDPGTEGS HPDQTSDRVG  300
GANGSMDCIH PTLPVDPKIG SSSTAQSFPH NYAGFAPTMQ CHCNQDAYRS SLNMSSTFSN  360
MLVSTLLSNP TVHAAARLAA SYWPAADSNI PVGPNQEVFA ENAQGRHIGS PPSMASVVAA  420
TVAAASAWWA TQGLLPLFAP PMAFPFVPVP TASFPTTDVQ RATENCPVDN APKECQVAQE  480
QGQPEAMIVV ASSGSDKSGK GEVSPHTELN ISPADKVETT PPTGAETSDA FGNKKKQDRS  540
SCGSNTPSSS DVEAEHVPEN QDQANDKTQQ ACCSNSSAGD MNHRRFRNIS STNDSWKEVS  600
EEGRMAFDKL FSRGKLPQSF SPPQAEGLKV VPRGEQDEAT TVTVDLNKSA AVMDHELDTL  660
VGPRATFPIE LSHLNMKSRR TGFKPYKRCS VEAKENRVPA ADEVGTKRIR LDSEPST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	8e-41	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG041730.3