PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG035560.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SRS
Protein Properties Length: 315aa    MW: 32500.4 Da    PI: 8.0722
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG035560.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702217.14e-671022463154
            DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssa. 94 
                       +gt+sCqdCGnqakkdC h+RCRtCCksrgfdCathvkstWvpaa+rrer++q+ +       +++++  kr+re    + s+++ t++ss+ 
  TRIDC7AG035560.2 102 AGTISCQDCGNQAKKDCPHMRCRTCCKSRGFDCATHVKSTWVPAARRRERHHQQPQG------QTSAEPFKRPREA--GQPSSTTPTTTSSGe 186
                       6899**********************************************7776654......4467889999997..444444444445540 PP

            DUF702  95 eskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                       ++++++ + ++P+evsseavfrcvr++ vd++e+e+aYqt+vsigGhvfkGiL+d G+++
  TRIDC7AG035560.2 187 HQQQMMAADRFPREVSSEAVFRCVRLGPVDEAEAEVAYQTTVSIGGHVFKGILHDVGPDT 246
                       5666778889***********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MAGFPLGGGG HHSRGGRDDD GSHPPGINPS SSSSAAAFLY ATTPSRGGFQ LWQGQPQPQH  60
EQQHHQFYGG ASSSIIRFAD DPAASGSSSR GGGRGSGAGA GAGTISCQDC GNQAKKDCPH  120
MRCRTCCKSR GFDCATHVKS TWVPAARRRE RHHQQPQGQT SAEPFKRPRE AGQPSSTTPT  180
TTSSGEHQQQ MMAADRFPRE VSSEAVFRCV RLGPVDEAEA EVAYQTTVSI GGHVFKGILH  240
DVGPDTSITG GTRTGHHAVE GSSPSTAAAG GAEGGSGSTG AAAVSSSAVV MDPYPTPGPY  300
GAYGGAPFFH GHHPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.12e-49SRS family protein