PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG032380.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1007aa    MW: 112425 Da    PI: 6.5968
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG032380.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B364.61.5e-2050151199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++p++ ae++      +++++  ++l+ +d++   W++++i+r++++r++lt+GW+ F + ++L +gD+v+F   ++
  TRIDC7AG032380.4  50 FCKTLTASDTSTHGGFSVPRRAAERIfprldfSLQPPA-QELQARDLHDTIWTFRHIFRGQPKRHLLTTGWSLFISGKRLLAGDSVLFI--RD 139
                       99*****************************9777665.49************************************************..45 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                        +++l+++++r+
  TRIDC7AG032380.4 140 AKQQLLLGIRRA 151
                       677789999997 PP
2Auxin_resp118.55.5e-39176259183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s F+++YnPras+seFv++++k++ka++ +++s+GmRf+m+fete+s +rr++Gt++g+sdldpvrW+nS+Wr+++
  TRIDC7AG032380.4 176 AAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNIQ 259
                       79**********************************9********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1007 aa     Download sequence    
RHYGESDPDT DEVYARMTLQ PVSNVTQCDK EILLASELAL KQNKPQTEFF CKTLTASDTS  60
THGGFSVPRR AAERIFPRLD FSLQPPAQEL QARDLHDTIW TFRHIFRGQP KRHLLTTGWS  120
LFISGKRLLA GDSVLFIRDA KQQLLLGIRR ANRQPTNLSS SVLSSDSMHI GVLAAAAHAA  180
ANNSQFTIFY NPRASPSEFV IPFAKYQKAV YGNQLSLGMR FRMMFETEES GTRRYMGTIT  240
GISDLDPVRW KNSQWRNIQV AWDEAAPSER RTRVSLWDIE PVIAPFFIYP TPLFTAKRAR  300
EPGMIDDDSS GMDNLFKRTM PWLGEEICKK DMNTQNSIVP GLNLAQSLQW MNMQQNLSLA  360
GTVMQPELLN SLAGKHVQNL SAADISRQIS FQPQFLQQNN IQFNTSLLPQ QNQQAEQLAK  420
AIATPNQLGN IMVLQKVDQN CNSGQKQHTV TQSVQGSQAN LNVTQPEHVA QAQFQQPRVI  480
LQAQLQQQQP LVQSHTVFQG GLQQIQVLQQ QQPHLQQQPQ HHQQVQHSVQ EQQQMKIQPV  540
HVSSDANMNT QLSDHQMKLQ LLKALHSQQH LTMEQQKMLF DLQQQVVNSQ SDPQQCVQGA  600
TQTVGFHNSN TIQYAAQQKA QSHQPIEDSP RGTIPVAKSD IVTSMGASSL NVAGRMQSVR  660
TDNVPSSSTS PSTTTNHVLL QSIPSSSKNQ SLPTAAKTSQ SSVVLGPTIE QEMKSYQSVK  720
PTIMIPKMIE QGPATERDYI TNPHMDYLDT SSSATSVCLS QADGSLQQNF PSSSFDQHQL  780
LRDTAPDSEF EISDPTNNLL FGVNIDGQLG LPLNADALLA NSIENDKFMD EMAGNGISNY  840
ISSKDSQQEL SSSMISHSLG VADMGFNSID SAINDPPFLN RNSRAPAPAH QRMRTYTKVH  900
KRGAVGRSID MNRYSGYDEL KHDIARMFGI EGQLGDQSRV GWKLVYEDHE KDVLLVGDDP  960
WEDFLNCVRC IRILSPQEEM QMRLVGDFGD GFLPNQACSS SDGGQPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.11e-164ARF family protein