PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG032380.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1053aa    MW: 117299 Da    PI: 6.5657
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG032380.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B364.51.6e-2096197199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++p++ ae++      +++++  ++l+ +d++   W++++i+r++++r++lt+GW+ F + ++L +gD+v+F   ++
  TRIDC7AG032380.3  96 FCKTLTASDTSTHGGFSVPRRAAERIfprldfSLQPPA-QELQARDLHDTIWTFRHIFRGQPKRHLLTTGWSLFISGKRLLAGDSVLFI--RD 185
                       99*****************************9777665.49************************************************..45 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                        +++l+++++r+
  TRIDC7AG032380.3 186 AKQQLLLGIRRA 197
                       677789999997 PP
2Auxin_resp118.45.8e-39222305183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s F+++YnPras+seFv++++k++ka++ +++s+GmRf+m+fete+s +rr++Gt++g+sdldpvrW+nS+Wr+++
  TRIDC7AG032380.3 222 AAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNIQ 305
                       79**********************************9********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1053 aa     Download sequence    
LPPPGSLVVY FPQGHSEQVA ASMRKDADAQ IPSYPNLPSK LICILHSVTM ESDPDTDEVY  60
ARMTLQPVSN VTQCDKEILL ASELALKQNK PQTEFFCKTL TASDTSTHGG FSVPRRAAER  120
IFPRLDFSLQ PPAQELQARD LHDTIWTFRH IFRGQPKRHL LTTGWSLFIS GKRLLAGDSV  180
LFIRDAKQQL LLGIRRANRQ PTNLSSSVLS SDSMHIGVLA AAAHAAANNS QFTIFYNPRA  240
SPSEFVIPFA KYQKAVYGNQ LSLGMRFRMM FETEESGTRR YMGTITGISD LDPVRWKNSQ  300
WRNIQVAWDE AAPSERRTRV SLWDIEPVIA PFFIYPTPLF TAKRAREPGM IDDDSSGMDN  360
LFKRTMPWLG EEICKKDMNT QNSIVPGLNL AQSLQWMNMQ QNLSLAGTVM QPELLNSLAG  420
KHVQNLSAAD ISRQISFQPQ FLQQNNIQFN TSLLPQQNQQ AEQLAKAIAT PNQLGNIMVL  480
QKVDQNCNSG QKQHTVTQSV QGSQANLNVT QPEHVAQAQF QQPRVILQAQ LQQQQPLVQS  540
HTVFQGGLQQ IQVLQQQQPH LQQQPQHHQQ VQHSVQEQQQ MKIQPVHVSS DANMNTQLSD  600
HQMKLQLLKA LHSQQHLTME QQKMLFDLQQ QVVNSQSDPQ QCVQGATQTV GFHNSNTIQY  660
AAQQKAQSHQ PIEDSPRGTI PVAKSDIVTS MGASSLNVAG RMQSVRTDNV PSSSTSPSTT  720
TNHVLLQSIP SSSKNQSLPT AAKTSQSSVV LGPTIEQEMK SYQSVKPTIM IPKMIEQGPA  780
TERDYITNPH MDYLDTSSSA TSVCLSQADG SLQQNFPSSS FDQHQLLRDT APDSEFEISD  840
PTNNLLFGVN IDGQLGLPLN ADALLANSIE NDKFMDEMAG NGISNYISSK DSQQELSSSM  900
ISHSLGVADM GFNSIDSAIN DPPFLNRNSR APAPAHQRMR TYTKVHKRGA VGRSIDMNRY  960
SGYDELKHDI ARMFGIEGQL GDQSRVGWKL VYEDHEKDVL LVGDDPWEDF LNCVRCIRIL  1020
SPQEEMQMRL VGDFGDGFLP NQACSSSDGG QPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein