PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG032380.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1085aa MW: 120372 Da PI: 6.5107

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG032380.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.5	1.7e-20	128	229	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ W++++i+r++++r++lt+GW+ F + ++L +gD+v+F ++ TRIDC7AG032380.2 128 FCKTLTASDTSTHGGFSVPRRAAERIfprldfSLQPPA-QELQARDLHDTIWTFRHIFRGQPKRHLLTTGWSLFISGKRLLAGDSVLFI--RD 217 99***************************9777665.49**********************************************..45 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 +++l+++++r+ TRIDC7AG032380.2 218 AKQQLLLGIRRA 229 677789999997 PP
2	Auxin_resp	118.4	6e-39	254	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s F+++YnPras+seFv++++k++ka++ +++s+GmRf+m+fete+s +rr++Gt++g+sdldpvrW+nS+Wr+++ TRIDC7AG032380.2 254 AAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNIQ 337 79********************************9******************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1085 aa Download sequence
TMAAPEGSGA GGGEGARGSR VNQELWYACA GPLVALPPPG SLVVYFPQGH SEQVAASMRK 60 DADAQIPSYP NLPSKLICIL HSVTMESDPD TDEVYARMTL QPVTQCDKEI LLASELALKQ 120 NKPQTEFFCK TLTASDTSTH GGFSVPRRAA ERIFPRLDFS LQPPAQELQA RDLHDTIWTF 180 RHIFRGQPKR HLLTTGWSLF ISGKRLLAGD SVLFIRDAKQ QLLLGIRRAN RQPTNLSSSV 240 LSSDSMHIGV LAAAAHAAAN NSQFTIFYNP RASPSEFVIP FAKYQKAVYG NQLSLGMRFR 300 MMFETEESGT RRYMGTITGI SDLDPVRWKN SQWRNIQVAW DEAAPSERRT RVSLWDIEPV 360 IAPFFIYPTP LFTAKRAREP GMIDDDSSGM DNLFKRTMPW LGEEICKKDM NTQNSIVPGL 420 NLAQSLQWMN MQQNLSLAGT VMQPELLNSL AGKHVQNLSA ADISRQISFQ PQFLQQNNIQ 480 FNTSLLPQQN QQAEQLAKAI ATPNQLGNIM VLQKVDQNCN SGQKQHTVTQ SVQGSQANLN 540 VTQPEHVAQA QFQQPRVILQ AQLQQQQPLV QSHTVFQGGL QQIQVLQQQQ PHLQQQPQHH 600 QQVQHSVQEQ QQMKIQPVHV SSDANMNTQL SDHQMKLQLL KALHSQQHLT MEQQKMLFDL 660 QQQVVNSQSD PQQCVQGATQ TVGFHNSNTI QYAAQQKAQS HQPIEDSPRG TIPVAKSDIV 720 TSMGASSLNV AGRMQSVRTD NVPSSSTSPS TTTNHVLLQS IPSSSKNQSL PTAAKTSQSS 780 VVLGPTIEQE MKSYQSVKPT IMIPKMIEQG PATERDYITN PHMDYLDTSS SATSVCLSQA 840 DGSLQQNFPS SSFDQHQLLR DTAPDSEFEI SDPTNNLLFG VNIDGQLGLP LNADALLANS 900 IENDKFMDEM AGNGISNYIS SKDSQQELSS SMISHSLGVA DMGFNSIDSA INDPPFLNRN 960 SRAPAPAHQR MRTYTKVHKR GAVGRSIDMN RYSGYDELKH DIARMFGIEG QLGDQSRVGW 1020 KLVYEDHEKD VLLVGDDPWE DFLNCVRCIR ILSPQEEMQM RLVGDFGDGF LPNQACSSSD 1080 GGQPW

Sequence ? help Back to Top

Protein Sequence Length: 1085 aa Download sequence

TMAAPEGSGA GGGEGARGSR VNQELWYACA GPLVALPPPG SLVVYFPQGH SEQVAASMRK  60
DADAQIPSYP NLPSKLICIL HSVTMESDPD TDEVYARMTL QPVTQCDKEI LLASELALKQ  120
NKPQTEFFCK TLTASDTSTH GGFSVPRRAA ERIFPRLDFS LQPPAQELQA RDLHDTIWTF  180
RHIFRGQPKR HLLTTGWSLF ISGKRLLAGD SVLFIRDAKQ QLLLGIRRAN RQPTNLSSSV  240
LSSDSMHIGV LAAAAHAAAN NSQFTIFYNP RASPSEFVIP FAKYQKAVYG NQLSLGMRFR  300
MMFETEESGT RRYMGTITGI SDLDPVRWKN SQWRNIQVAW DEAAPSERRT RVSLWDIEPV  360
IAPFFIYPTP LFTAKRAREP GMIDDDSSGM DNLFKRTMPW LGEEICKKDM NTQNSIVPGL  420
NLAQSLQWMN MQQNLSLAGT VMQPELLNSL AGKHVQNLSA ADISRQISFQ PQFLQQNNIQ  480
FNTSLLPQQN QQAEQLAKAI ATPNQLGNIM VLQKVDQNCN SGQKQHTVTQ SVQGSQANLN  540
VTQPEHVAQA QFQQPRVILQ AQLQQQQPLV QSHTVFQGGL QQIQVLQQQQ PHLQQQPQHH  600
QQVQHSVQEQ QQMKIQPVHV SSDANMNTQL SDHQMKLQLL KALHSQQHLT MEQQKMLFDL  660
QQQVVNSQSD PQQCVQGATQ TVGFHNSNTI QYAAQQKAQS HQPIEDSPRG TIPVAKSDIV  720
TSMGASSLNV AGRMQSVRTD NVPSSSTSPS TTTNHVLLQS IPSSSKNQSL PTAAKTSQSS  780
VVLGPTIEQE MKSYQSVKPT IMIPKMIEQG PATERDYITN PHMDYLDTSS SATSVCLSQA  840
DGSLQQNFPS SSFDQHQLLR DTAPDSEFEI SDPTNNLLFG VNIDGQLGLP LNADALLANS  900
IENDKFMDEM AGNGISNYIS SKDSQQELSS SMISHSLGVA DMGFNSIDSA INDPPFLNRN  960
SRAPAPAHQR MRTYTKVHKR GAVGRSIDMN RYSGYDELKH DIARMFGIEG QLGDQSRVGW  1020
KLVYEDHEKD VLLVGDDPWE DFLNCVRCIR ILSPQEEMQM RLVGDFGDGF LPNQACSSSD  1080
GGQPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG032380.2