PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG032380.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1090aa MW: 120900 Da PI: 6.5656

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG032380.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.5	1.7e-20	133	234	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ W++++i+r++++r++lt+GW+ F + ++L +gD+v+F ++ TRIDC7AG032380.1 133 FCKTLTASDTSTHGGFSVPRRAAERIfprldfSLQPPA-QELQARDLHDTIWTFRHIFRGQPKRHLLTTGWSLFISGKRLLAGDSVLFI--RD 222 99***************************9777665.49**********************************************..45 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 +++l+++++r+ TRIDC7AG032380.1 223 AKQQLLLGIRRA 234 677789999997 PP
2	Auxin_resp	118.3	6e-39	259	342	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s F+++YnPras+seFv++++k++ka++ +++s+GmRf+m+fete+s +rr++Gt++g+sdldpvrW+nS+Wr+++ TRIDC7AG032380.1 259 AAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNIQ 342 79********************************9******************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1090 aa Download sequence
ARTMAAPEGS GAGGGEGARG SRVNQELWYA CAGPLVALPP PGSLVVYFPQ GHSEQVAASM 60 RKDADAQIPS YPNLPSKLIC ILHSVTMESD PDTDEVYARM TLQPVSNVTQ CDKEILLASE 120 LALKQNKPQT EFFCKTLTAS DTSTHGGFSV PRRAAERIFP RLDFSLQPPA QELQARDLHD 180 TIWTFRHIFR GQPKRHLLTT GWSLFISGKR LLAGDSVLFI RDAKQQLLLG IRRANRQPTN 240 LSSSVLSSDS MHIGVLAAAA HAAANNSQFT IFYNPRASPS EFVIPFAKYQ KAVYGNQLSL 300 GMRFRMMFET EESGTRRYMG TITGISDLDP VRWKNSQWRN IQVAWDEAAP SERRTRVSLW 360 DIEPVIAPFF IYPTPLFTAK RAREPGMIDD DSSGMDNLFK RTMPWLGEEI CKKDMNTQNS 420 IVPGLNLAQS LQWMNMQQNL SLAGTVMQPE LLNSLAGKHV QNLSAADISR QISFQPQFLQ 480 QNNIQFNTSL LPQQNQQAEQ LAKAIATPNQ LGNIMVLQKV DQNCNSGQKQ HTVTQSVQGS 540 QANLNVTQPE HVAQAQFQQP RVILQAQLQQ QQPLVQSHTV FQGGLQQIQV LQQQQPHLQQ 600 QPQHHQQVQH SVQEQQQMKI QPVHVSSDAN MNTQLSDHQM KLQLLKALHS QQHLTMEQQK 660 MLFDLQQQVV NSQSDPQQCV QGATQTVGFH NSNTIQYAAQ QKAQSHQPIE DSPRGTIPVA 720 KSDIVTSMGA SSLNVAGRMQ SVRTDNVPSS STSPSTTTNH VLLQSIPSSS KNQSLPTAAK 780 TSQSSVVLGP TIEQEMKSYQ SVKPTIMIPK MIEQGPATER DYITNPHMDY LDTSSSATSV 840 CLSQADGSLQ QNFPSSSFDQ HQLLRDTAPD SEFEISDPTN NLLFGVNIDG QLGLPLNADA 900 LLANSIENDK FMDEMAGNGI SNYISSKDSQ QELSSSMISH SLGVADMGFN SIDSAINDPP 960 FLNRNSRAPA PAHQRMRTYT KVHKRGAVGR SIDMNRYSGY DELKHDIARM FGIEGQLGDQ 1020 SRVGWKLVYE DHEKDVLLVG DDPWEDFLNC VRCIRILSPQ EEMQMRLVGD FGDGFLPNQA 1080 CSSSDGGQPW

Sequence ? help Back to Top

Protein Sequence Length: 1090 aa Download sequence

ARTMAAPEGS GAGGGEGARG SRVNQELWYA CAGPLVALPP PGSLVVYFPQ GHSEQVAASM  60
RKDADAQIPS YPNLPSKLIC ILHSVTMESD PDTDEVYARM TLQPVSNVTQ CDKEILLASE  120
LALKQNKPQT EFFCKTLTAS DTSTHGGFSV PRRAAERIFP RLDFSLQPPA QELQARDLHD  180
TIWTFRHIFR GQPKRHLLTT GWSLFISGKR LLAGDSVLFI RDAKQQLLLG IRRANRQPTN  240
LSSSVLSSDS MHIGVLAAAA HAAANNSQFT IFYNPRASPS EFVIPFAKYQ KAVYGNQLSL  300
GMRFRMMFET EESGTRRYMG TITGISDLDP VRWKNSQWRN IQVAWDEAAP SERRTRVSLW  360
DIEPVIAPFF IYPTPLFTAK RAREPGMIDD DSSGMDNLFK RTMPWLGEEI CKKDMNTQNS  420
IVPGLNLAQS LQWMNMQQNL SLAGTVMQPE LLNSLAGKHV QNLSAADISR QISFQPQFLQ  480
QNNIQFNTSL LPQQNQQAEQ LAKAIATPNQ LGNIMVLQKV DQNCNSGQKQ HTVTQSVQGS  540
QANLNVTQPE HVAQAQFQQP RVILQAQLQQ QQPLVQSHTV FQGGLQQIQV LQQQQPHLQQ  600
QPQHHQQVQH SVQEQQQMKI QPVHVSSDAN MNTQLSDHQM KLQLLKALHS QQHLTMEQQK  660
MLFDLQQQVV NSQSDPQQCV QGATQTVGFH NSNTIQYAAQ QKAQSHQPIE DSPRGTIPVA  720
KSDIVTSMGA SSLNVAGRMQ SVRTDNVPSS STSPSTTTNH VLLQSIPSSS KNQSLPTAAK  780
TSQSSVVLGP TIEQEMKSYQ SVKPTIMIPK MIEQGPATER DYITNPHMDY LDTSSSATSV  840
CLSQADGSLQ QNFPSSSFDQ HQLLRDTAPD SEFEISDPTN NLLFGVNIDG QLGLPLNADA  900
LLANSIENDK FMDEMAGNGI SNYISSKDSQ QELSSSMISH SLGVADMGFN SIDSAINDPP  960
FLNRNSRAPA PAHQRMRTYT KVHKRGAVGR SIDMNRYSGY DELKHDIARM FGIEGQLGDQ  1020
SRVGWKLVYE DHEKDVLLVG DDPWEDFLNC VRCIRILSPQ EEMQMRLVGD FGDGFLPNQA  1080
CSSSDGGQPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG032380.1