PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC7AG031730.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 350aa MW: 37576.5 Da PI: 6.5271 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.8 | 6.6e-10 | 26 | 75 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqk 46 W t E++ll++av ++G+ +W+++a++++ ++t+ +c++r++ TRIDC7AG031730.4 26 WGTLEELLLACAVSRHGTSSWESVASEVQsrspsaaARLTPTSCRLRFRL 75 9999********************************99*********985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 350 aa Download sequence |
MAARSDDPDV SPESSSPAAA AGGEIWGTLE ELLLACAVSR HGTSSWESVA SEVQSRSPSA 60 AARLTPTSCR LRFRLLHRRF AAGADEDGGG EPDPNAAVSD AWVDELRKLR VAELRREVER 120 YDLSIGSLQS KVKRLKEERE RSLSGETTPA FKDERETGND SPEEAGGENG LSGEASARSC 180 KESNSSDLKP PPGHDSGGAA ADDDAEVKDE PAAGEMAAKD EASGESAAGS KEADAVKESS 240 DVQSSASPSR KRRRRLRKVG GGDVASTSAP VPLPAAEAQP LLAFLESVRT SKSGAVFERR 300 LESQVKNFSR FLFFSRKKSL IYHFPPSLPS VKKRHKCSIH HLVQLNNYLH |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 250 | 254 | RKRRR |
2 | 250 | 257 | RKRRRRLR |
3 | 250 | 258 | RKRRRRLRK |
4 | 251 | 256 | KRRRRL |
5 | 252 | 258 | RRRRLRK |
6 | 253 | 258 | RRRLRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G42150.1 | 3e-16 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC7AG031730.4 |