PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG028170.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 462aa    MW: 53171.3 Da    PI: 7.1623
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG028170.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.52e-10135175346
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       +WT eE e++ + v++ G++ Wkt a+++g  +++ ++k+ w+ 
  TRIDC7AG028170.4 135 KWTDEEKEQIRRFVEKNGTD-WKTLAQELG--KSEIHVKHAWRR 175
                       8*******************.********8..9*******9986 PP
2Myb_DNA-binding28.63.3e-09275315346
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       +WT +E e++ + v+  G++ Wkt ar++g  +++ ++k+ w+ 
  TRIDC7AG028170.4 275 KWTDDEKEQIRRFVESNGTD-WKTLARELG--KSEIHVKDTWRR 315
                       8*******************.********8..9*******9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MFRTEGGDGE GIGGGKQKEK AALSKKKGKR VSFANSAEVF SIEGGDNEED GISNESKSVH  60
GRFTPEEDAA LMEAMRGYAE MKQLGEKGLE MIGSCRKYPE LKGCWDDIAK SLPHRPYLAI  120
YRRAHTLLHR SSGCKWTDEE KEQIRRFVEK NGTDWKTLAQ ELGKSEIHVK HAWRRIKPKK  180
KKGADDEEDV SGGESELVHG HRFTTEEDAI LMEAMRDYAE LKQLGEKGLE MIGSCSKYPE  240
LKGCWDDIAK SLPHRPHEAI YHRARILLYR SAERKWTDDE KEQIRRFVES NGTDWKTLAR  300
ELGKSEIHVK DTWRRIKPKN LKKGRWTQDE HQNLFDLVNL DLRLKAHQIK NPDHRLLRDN  360
ISWEAISDKL TTRNHKNCCL KWYETLASPM VKEGVWADVD DYLLVEALQK VDAVCIEDVD  420
WDSLLDHRLV LSADLTHTTF NYAMFLITKW HVIGVNSLSC EG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-78MYB_related family protein