PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG028170.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 432aa MW: 48231.4 Da PI: 9.8666

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG028170.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.7	3e-09	334	374	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT +E e++ + v+ G++ Wkt ar++g +++ ++k+ w+ TRIDC7AG028170.3 334 KWTDDEKEQIRRFVESNGTD-WKTLARELG--KSEIHVKDTWRR 374 8*****************.****8..9*****9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
FDTTVGKEQA ETSGLMEVTP CLELAQGDMS KDKVKKVKKK KKEEKEAEKT GQQKQTFDTT 60 VGNSGAKYAE GDKVEGKQSS KAKKSKRKSD DGAPAADQIV TREYKKKKKE HSVVLEESSQ 120 TENSNEGENR EIKKGGKERS KASPDFSENA SAGGEEAGVD GNDDKKKKKS KGIGGGKKEK 180 EKSVRSTKGK QVSFADSAEM FRTEGGDGEG IGGGKQKEKA ALSKKKGKRV SFANSAEVFS 240 IEGGDNEEDG ISNESKSVHG RFTPEEDAAL MEAMRGYAEM KQLGEKGLEM IGSCRKYPEL 300 KGCWDDIAKS LPHRPHEAIY HRARILLYRS AERKWTDDEK EQIRRFVESN GTDWKTLARE 360 LGKSEIHVKD TWRRIKPKNL KKGRWTQDEH QNLFDLVNLD LRLKAHQIKN PDHRLVCNLP 420 MLLILCILVK LS

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

FDTTVGKEQA ETSGLMEVTP CLELAQGDMS KDKVKKVKKK KKEEKEAEKT GQQKQTFDTT  60
VGNSGAKYAE GDKVEGKQSS KAKKSKRKSD DGAPAADQIV TREYKKKKKE HSVVLEESSQ  120
TENSNEGENR EIKKGGKERS KASPDFSENA SAGGEEAGVD GNDDKKKKKS KGIGGGKKEK  180
EKSVRSTKGK QVSFADSAEM FRTEGGDGEG IGGGKQKEKA ALSKKKGKRV SFANSAEVFS  240
IEGGDNEEDG ISNESKSVHG RFTPEEDAAL MEAMRGYAEM KQLGEKGLEM IGSCRKYPEL  300
KGCWDDIAKS LPHRPHEAIY HRARILLYRS AERKWTDDEK EQIRRFVESN GTDWKTLARE  360
LGKSEIHVKD TWRRIKPKNL KKGRWTQDEH QNLFDLVNLD LRLKAHQIKN PDHRLVCNLP  420
MLLILCILVK LS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	108	KRKSDDGAPAADQIVTREYKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	6e-45	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG028170.3