PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG028170.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 573aa    MW: 64520.9 Da    PI: 9.5574
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG028170.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.12.6e-10335375346
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       +WT eE e++ + v++ G++ Wkt a+++g  +++ ++k+ w+ 
  TRIDC7AG028170.2 335 KWTDEEKEQIRRFVEKNGTD-WKTLAQELG--KSEIHVKHAWRR 375
                       8*******************.********8..9*******9986 PP
2Myb_DNA-binding28.24.4e-09475515346
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       +WT +E e++ + v+  G++ Wkt ar++g  +++ ++k+ w+ 
  TRIDC7AG028170.2 475 KWTDDEKEQIRRFVESNGTD-WKTLARELG--KSEIHVKDTWRR 515
                       8*******************.********8..9*******9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
SFDTTVGKEQ AETSGLMEVT PCLELAQGDM SKDKVKKVKK KKKEEKEAEK TGQQKQTFDT  60
TVGNSGAKYA EGDKVEGKQS SKAKKSKRKS DDGAPAADQI VTREYKKKKK EHSVVLEESS  120
QTENSNEGEN REIKKGGKER SKASPDFSEN ASAGGEEAGV DGNDDKKKKK SKGIGGGKKE  180
KEKSVRSTKG KQVSFADSAE MFRTEGGDGE GIGGGKQKEK AALSKKKGKR VSFANSAEVF  240
SIEGGDNEED GISNESKSVH GRFTPEEDAA LMEAMRGYAE MKQLGEKGLE MIGSCRKYPE  300
LKGCWDDIAK SLPHRPYLAI YRRAHTLLHR SSGCKWTDEE KEQIRRFVEK NGTDWKTLAQ  360
ELGKSEIHVK HAWRRIKPKK KKGADDEEDV SGGESELVHG HRFTTEEDAI LMEAMRDYAE  420
LKQLGEKGLE MIGSCSKYPE LKGCWDDIAK SLPHRPHEAI YHRARILLYR SAERKWTDDE  480
KEQIRRFVES NGTDWKTLAR ELGKSEIHVK DTWRRIKPKN LKKGRWTQDE HQNLFDLVNL  540
DLRLKAHQIK NPDHRLVCNL PMLLILCILV KLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
187109KRKSDDGAPAADQIVTREYKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.14e-43MYB_related family protein