PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG028170.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 833aa MW: 94369.3 Da PI: 9.5302

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG028170.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.5	4.1e-10	496	536	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++ + v++ G++ Wkt a+++g +++ ++k+ w+ TRIDC7AG028170.1 496 KWTDEEKEQIRRFVEKNGTD-WKTLAQELG--KSEIHVKHAWRR 536 8*****************.****8..9*****9986 PP
2	Myb_DNA-binding	27.6	6.9e-09	636	676	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT +E e++ + v+ G++ Wkt ar++g +++ ++k+ w+ TRIDC7AG028170.1 636 KWTDDEKEQIRRFVESNGTD-WKTLARELG--KSEIHVKDTWRR 676 8*****************.****8..9*****9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 833 aa Download sequence
PTPNRAARPP PAVPRSSLAV HMDEERVERE GRRLKKKAKH RDEEGKAKDK LKRRTDEKAT 60 EADSVAEKVK EEAVVGAAEE KEGHKRKKGK GRSEETKSKE NVPVVSGSIE NGVGEEQAKK 120 SGSMAPCSEG AMNKDNVKKD KKRRKEEKKK EKEADMTEQK QSFDTTVGKE QAETSGLMEV 180 TPCLELAQGD MSKDKVKKVK KKKKEEKEAE KTGQQKQTFD TTVGNSGAKY AEGDKVEGKQ 240 SSKAKKSKRK SDDGAPAADQ IVTREYKKKK KEHSVVLEES SQTENSNEGE NREIKKGGKE 300 RSKASPDFSE NASAGGEEAG VDGNDDKKKK KSKGIGGGKK EKEKSVRSTK GKQVSFADSA 360 EMFRTEGGDG EGIGGGKQKE KAALSKKKGK RVSFANSAEV FSIEGGDNEE DGISNESKSV 420 HGRFTPEEDA ALMEAMRGYA EMKQLGEKGL EMIGSCRKYP ELKGCWDDIA KSLPHRPYLA 480 IYRRAHTLLH RSSGCKWTDE EKEQIRRFVE KNGTDWKTLA QELGKSEIHV KHAWRRIKPK 540 KKKGADDEED VSGGESELVH GHRFTTEEDA ILMEAMRDYA ELKQLGEKGL EMIGSCSKYP 600 ELKGCWDDIA KSLPHRPHEA IYHRARILLY RSAERKWTDD EKEQIRRFVE SNGTDWKTLA 660 RELGKSEIHV KDTWRRIKPK NLKKGRWTQD EHQNLFDLVN LDLRLKAHQI KNPDHRLLRD 720 NISWEAISDK LTTRNHKNCC LKWYETLASP MVKEGVWADV DDYLLVEALQ KVDAVCIEDV 780 DWDSLLDHRS GEVCRQRWNQ MVRAIGGHRE KPFIEQVEVL SRRYCPEMIE YRK

Sequence ? help Back to Top

Protein Sequence Length: 833 aa Download sequence

PTPNRAARPP PAVPRSSLAV HMDEERVERE GRRLKKKAKH RDEEGKAKDK LKRRTDEKAT  60
EADSVAEKVK EEAVVGAAEE KEGHKRKKGK GRSEETKSKE NVPVVSGSIE NGVGEEQAKK  120
SGSMAPCSEG AMNKDNVKKD KKRRKEEKKK EKEADMTEQK QSFDTTVGKE QAETSGLMEV  180
TPCLELAQGD MSKDKVKKVK KKKKEEKEAE KTGQQKQTFD TTVGNSGAKY AEGDKVEGKQ  240
SSKAKKSKRK SDDGAPAADQ IVTREYKKKK KEHSVVLEES SQTENSNEGE NREIKKGGKE  300
RSKASPDFSE NASAGGEEAG VDGNDDKKKK KSKGIGGGKK EKEKSVRSTK GKQVSFADSA  360
EMFRTEGGDG EGIGGGKQKE KAALSKKKGK RVSFANSAEV FSIEGGDNEE DGISNESKSV  420
HGRFTPEEDA ALMEAMRGYA EMKQLGEKGL EMIGSCRKYP ELKGCWDDIA KSLPHRPYLA  480
IYRRAHTLLH RSSGCKWTDE EKEQIRRFVE KNGTDWKTLA QELGKSEIHV KHAWRRIKPK  540
KKKGADDEED VSGGESELVH GHRFTTEEDA ILMEAMRDYA ELKQLGEKGL EMIGSCSKYP  600
ELKGCWDDIA KSLPHRPHEA IYHRARILLY RSAERKWTDD EKEQIRRFVE SNGTDWKTLA  660
RELGKSEIHV KDTWRRIKPK NLKKGRWTQD EHQNLFDLVN LDLRLKAHQI KNPDHRLLRD  720
NISWEAISDK LTTRNHKNCC LKWYETLASP MVKEGVWADV DDYLLVEALQ KVDAVCIEDV  780
DWDSLLDHRS GEVCRQRWNQ MVRAIGGHRE KPFIEQVEVL SRRYCPEMIE YRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	49	54	DKLKRR
2	141	145	KKRRK
3	248	270	KRKSDDGAPAADQIVTREYKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	2e-98	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG028170.1