PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG025850.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 230aa MW: 25385.1 Da PI: 7.7701

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG025850.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45	2.5e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +G +W+ +++ g+ R++k+c++rw +yl TRIDC7AG025850.3 14 KGPWTAEEDQKLVGFLLTHGHYCWRVVPKLAGLLRCGKSCRLRWTNYL 61 79****************99******99**********97 PP
2	Myb_DNA-binding	50.7	4e-16	70	113	4	47
S-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqky 47 + eE++l +d+++qlG++ W++Ia+ ++ gRt++++k++w+++ TRIDC7AG025850.3 70 LSDEEQQLVIDLHAQLGNRcVWSKIAAQLP-GRTDNEIKNHWNTH 113 589*************************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MGRQPCCDKV GLKKGPWTAE EDQKLVGFLL THGHYCWRVV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SDEEQQLVID LHAQLGNRCV WSKIAAQLPG RTDNEIKNHW NTHIKKKLRK 120 MGIDPVTHRP LGQEAPPPLQ HPPPPPTATS WQQLDGAERS QQAEEEDVKA VPLIQPHEVT 180 AVPPTASSNC SVSPASVISP SCSSSSAASG LEAAEWPEPM YLLGMDGIMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66230.1	4e-82	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG025850.3