PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG019880.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1025aa    MW: 114377 Da    PI: 6.6392
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG019880.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.32.5e-2287188199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++   W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F   +
  TRIDC7AG019880.9  87 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI--R 175
                       99*****************************96555544..8************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7AG019880.9 176 DEKSQLLLGIRRA 188
                       5677789999997 PP
2Auxin_resp122.92.2e-40213295183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds  rr++Gt++g+ dldpvrW+nS+Wr+L+
  TRIDC7AG019880.9 213 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 295
                       79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1025 aa     Download sequence    
LSSTFHRATA SRQVAASMHK EVDIIPNYPS LPSKLICKLL SLTLHADSET DEVYAQMTLQ  60
PVNKYDRDAM LASELGLKQN KQPVEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLDFTM  120
QPPAQELMAK DLHDIPWKFR HIFRGQPKRH LLTTGWSVFV STKRLLAGDS VLFIRDEKSQ  180
LLLGIRRATR PQPALSSSVL SSDSMHIGIL AAAAHAAANS SPFTIFYNPR ASPSEFVIPL  240
AKYNKALYTQ VSLGMRFRML FETEDSGVRR YMGTITGIGD LDPVRWKNSH WRNLQVGWDE  300
STASERRTRV SIWEIEPVAT PFYICPPPFF RPKLPKQPGM PDDEGEVDSA FKRAMPWLGD  360
DFALKDVQSQ LFPGLSLVQW MAMQQNPQML PAGAPAVQAP YLNSSAMAMQ DGMGTGNDDL  420
MRRFNMQSQN ISLPNSQVGS KMDHAAMAQH QQQSHQLQQQ QQVQQSQQSS AVQQQQAQLL  480
QQNAIHLQQQ QEHLQRQQSL PQQQQEHLQR QQSQPQQQLK TAASMPSMEQ HKLREQQPQG  540
GQAVSQAQML SQIFQPSSSQ LQQLGLPKSP TQRPGFPGLP TASSLQQPAL GQAPQVQQAA  600
EYQQALLQSQ QQQLQQLSQP EMQLQLLQKI QQQNMLSQLN PQHQSQLMQQ LSQKNQEYLQ  660
QQILQHQLSG SDAMVQFKQS HQTPSNNITG SLTPQQLARS HSALAESEDP SSSTAPSANR  720
LSPMNSLSRT HQGSRNLTDM TTSPHIDNLL QEIQSKPDNR NKNDLQSSKE TIPVPNRYPV  780
SDQLDASSAT SFCLDESPRE GFSFPPVCLD SNAQVDPRDN FLIAENVDSL MPDALLSRGM  840
GSGKDICNLP SGQRDHREVD NELSSAAFSS QSFGVPDISF KPGCSGDIAV NDGGMPSQGL  900
WNNQTQRMRT FTKVQKRGSV GRSIDITRYT NYDELRHDLA CMFGIQGQLE DPYRMDWKLV  960
YVDHENDILL VGDDPWEEFV SCVKSIKILS SVEVQQMSLD GDLGGIPSQT QACSASDDAN  1020
AWRGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein