PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG019880.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1026aa    MW: 114472 Da    PI: 6.5446
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG019880.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.32.5e-2288189199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++   W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F   +
  TRIDC7AG019880.8  88 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI--R 176
                       99*****************************96555544..8************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7AG019880.8 177 DEKSQLLLGIRRA 189
                       5677789999997 PP
2Auxin_resp122.92.2e-40214296183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds  rr++Gt++g+ dldpvrW+nS+Wr+L+
  TRIDC7AG019880.8 214 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 296
                       79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1026 aa     Download sequence    
QPCRLLSTGP QRAEVAASMH KEVDIIPNYP SLPSKLICKL LSLTLHADSE TDEVYAQMTL  60
QPVNKYDRDA MLASELGLKQ NKQPVEFFCK TLTASDTSTH GGFSVPRRAA EKIFPPLDFT  120
MQPPAQELMA KDLHDIPWKF RHIFRGQPKR HLLTTGWSVF VSTKRLLAGD SVLFIRDEKS  180
QLLLGIRRAT RPQPALSSSV LSSDSMHIGI LAAAAHAAAN SSPFTIFYNP RASPSEFVIP  240
LAKYNKALYT QVSLGMRFRM LFETEDSGVR RYMGTITGIG DLDPVRWKNS HWRNLQVGWD  300
ESTASERRTR VSIWEIEPVA TPFYICPPPF FRPKLPKQPG MPDDEGEVDS AFKRAMPWLG  360
DDFALKDVQS QLFPGLSLVQ WMAMQQNPQM LPAGAPAVQA PYLNSSAMAM QDGMGTGNDD  420
LMRRFNMQSQ NISLPNSQVG SKMDHAAMAQ HQQQSHQLQQ QQQVQQSQQS SAVQQQQAQL  480
LQQNAIHLQQ QQEHLQRQQS LPQQQQEHLQ RQQSQPQQQL KTAASMPSME QHKLREQQPQ  540
GGQAVSQAQM LSQIFQPSSS QLQQLGLPKS PTQRPGFPGL PTASSLQQPA LGQAPQVQQA  600
AEYQQALLQS QQQQLQQLSQ PEMQLQLLQK IQQQNMLSQL NPQHQSQLMQ QLSQKNQEYL  660
QQQILQHQLS GSDAMVQFKQ SHQTPSNNIT GSLTPQQLAR SHSALAESED PSSSTAPSAN  720
RLSPMNSLSR THQGSRNLTD MTTSPHIDNL LQEIQSKPDN RNKNDLQSSK ETIPVPNRYP  780
VSDQLDASSA TSFCLDESPR EGFSFPPVCL DSNAQVDPRD NFLIAENVDS LMPDALLSRG  840
MGSGKDICNL PSGQRDHREV DNELSSAAFS SQSFGVPDIS FKPGCSGDIA VNDGGMPSQG  900
LWNNQTQRMR TFTKVQKRGS VGRSIDITRY TNYDELRHDL ACMFGIQGQL EDPYRMDWKL  960
VYVDHENDIL LVGDDPWEEF VSCVKSIKIL SSVEVQQMSL DGDLGGIPSQ TQACSASDDA  1020
NAWRGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein