PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG019880.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 954aa    MW: 105746 Da    PI: 6.136
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG019880.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.52.3e-22127228199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++   W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F   +
  TRIDC7AG019880.6 127 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI--R 215
                       99*****************************96555544..8************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7AG019880.6 216 DEKSQLLLGIRRA 228
                       5677789999997 PP
2Auxin_resp123.12e-40253335183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds  rr++Gt++g+ dldpvrW+nS+Wr+L+
  TRIDC7AG019880.6 253 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 335
                       79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 954 aa     Download sequence    
DGCTVSNHWA RVCEAGEKKA INSELWHACS GPLVAMPPVG SLVVYFPQGH SEQVAASMHK  60
EVDIIPNYPS LPSKLICKLL SLTLHADSET DEVYAQMTLQ PVNKYDRDAM LASELGLKQN  120
KQPVEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLDFTM QPPAQELMAK DLHDIPWKFR  180
HIFRGQPKRH LLTTGWSVFV STKRLLAGDS VLFIRDEKSQ LLLGIRRATR PQPALSSSVL  240
SSDSMHIGIL AAAAHAAANS SPFTIFYNPR ASPSEFVIPL AKYNKALYTQ VSLGMRFRML  300
FETEDSGVRR YMGTITGIGD LDPVRWKNSH WRNLQVGWDE STASERRTRV SIWEIEPVAT  360
PFYICPPPFF RPKLPKQPGM PDDEGEVDSA FKRAMPWLGD DFALKDVQSQ LFPGLSLVQW  420
MAMQQNPQML PAGAPAVQAP YLNSSAMAMQ DGMGTAMEQH KLREQQPQGG QAVSQAQMLS  480
QIFQPSSSQL QQLGLPKSPT QRPGFPGLPT ASSLQQPALG QAPQVQQAAE YQQALLQSQQ  540
QQLQQLSQPE MQLQLLQKIQ QQNMLSQLNP QHQSQLMQQL SQKNQEYLQQ QILQHQLSGS  600
DAMVQFKQSH QTPSNNITGS LTPQQLARSH SALAESEDPS SSTAPSANRL SPMNSLSRTH  660
QGSRNLTDMT TSPHIDNLLQ EIQSKPDNRN KNDLQSSKET IPVPNRYPVS DQLDASSATS  720
FCLDESPREG FSFPPVCLDS NAQVDPRDNF LIAENVDSLM PDALLSRGMG SGKDICNLPS  780
GQRDHREVDN ELSSAAFSSQ SFGVPDISFK PGCSGDIAVN DGGMPSQGLW NNQTQRMRTF  840
TKVQKRGSVG RSIDITRYTN YDELRHDLAC MFGIQGQLED PYRMDWKLVY VDHENDILLV  900
GDDPWEEFVS CVKSIKILSS VEVQQMSLDG DLGGIPSQTQ ACSASDDANA WRGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein