PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG019880.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1066aa    MW: 118562 Da    PI: 6.361
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG019880.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.22.6e-22128229199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++   W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F   +
  TRIDC7AG019880.3 128 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI--R 216
                       99*****************************96555544..8************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7AG019880.3 217 DEKSQLLLGIRRA 229
                       5677789999997 PP
2Auxin_resp122.92.3e-40254336183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds  rr++Gt++g+ dldpvrW+nS+Wr+L+
  TRIDC7AG019880.3 254 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 336
                       79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1066 aa     Download sequence    
MKDQESAGVS PGPPEAGEKK AINSELWHAC SGPLVAMPPV GSLVVYFPQG HSEQVAASMH  60
KEVDIIPNYP SLPSKLICKL LSLTLHADSE TDEVYAQMTL QPVNKYDRDA MLASELGLKQ  120
NKQPVEFFCK TLTASDTSTH GGFSVPRRAA EKIFPPLDFT MQPPAQELMA KDLHDIPWKF  180
RHIFRGQPKR HLLTTGWSVF VSTKRLLAGD SVLFIRDEKS QLLLGIRRAT RPQPALSSSV  240
LSSDSMHIGI LAAAAHAAAN SSPFTIFYNP RASPSEFVIP LAKYNKALYT QVSLGMRFRM  300
LFETEDSGVR RYMGTITGIG DLDPVRWKNS HWRNLQVGWD ESTASERRTR VSIWEIEPVA  360
TPFYICPPPF FRPKLPKQPG MPDDEGEVDS AFKRAMPWLG DDFALKDVQS QLFPGLSLVQ  420
WMAMQQNPQM LPAGAPAVQA PYLNSSAMAM QDGMGTGNDD LMRRFNMQSQ NISLPNSQVG  480
SKMDHAAMAQ HQQQSHQLQQ QQQVQQSQQS SAVQQQQAQL LQQNAIHLQQ QQEHLQRQQS  540
LPQQQQEHLQ RQQSQPQQQL KTAASMPSME QHKLREQQPQ GGQAVSQAQM LSQIFQPSSS  600
QLQQLGLPKS PTQRPGFPGL PTASSLQQPA LGQAPQVQQA AEYQQALLQS QQQQLQQLSQ  660
PEMQLQLLQK IQQQNMLSQL NPQHQSQLMQ QLSQKNQEYL QQQILQHQLS GSDAMVQFKQ  720
SHQTPSNNIT GSLTPQQLAR SHSALAESED PSSSTAPSAN RLSPMNSLSR THQGSRNLTD  780
MTTSPHIDNL LQEIQSKPDN RNKNDLQSSK ETIPVPNRYP VSDQLDASSA TSFCLDESPR  840
EGFSFPPVCL DSNAQVDPRD NFLIAENVDS LMPDALLSRG MGSGKDICNL PSGQRDHREV  900
DNELSSAAFS SQSFGVPDIS FKPGCSGDIA VNDGGMPSQG LWNNQTQRMR TFTKVQKRGS  960
VGRSIDITRY TNYDELRHDL ACMFGIQGQL EDPYRMDWKL VYVDHENDIL LVGDDPWEEF  1020
VSCVKSIKIL SSVEVQQMSL DGDLGGIPSQ TQACSASDDA NAWRGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein