PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG019880.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 906aa MW: 101182 Da PI: 6.5126

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG019880.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.4	8.3e-16	6	69	34	99
SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++l+ +d++ W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ +l+++++r+ TRIDC7AG019880.1 6 QELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI--RDEKSQLLLGIRRA 69 4899**********************************************..45677789999997 PP
2	Auxin_resp	123.2	1.9e-40	94	176	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds rr++Gt++g+ dldpvrW+nS+Wr+L+ TRIDC7AG019880.1 94 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 176 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 906 aa Download sequence
MQPPAQELMA KDLHDIPWKF RHIFRGQPKR HLLTTGWSVF VSTKRLLAGD SVLFIRDEKS 60 QLLLGIRRAT RPQPALSSSV LSSDSMHIGI LAAAAHAAAN SSPFTIFYNP RASPSEFVIP 120 LAKYNKALYT QVSLGMRFRM LFETEDSGVR RYMGTITGIG DLDPVRWKNS HWRNLQVGWD 180 ESTASERRTR VSIWEIEPVA TPFYICPPPF FRPKLPKQPG MPDDEGEVDS AFKRAMPWLG 240 DDFALKDVQS QLFPGLSLVQ WMAMQQNPQM LPAGAPAVQA PYLNSSAMAM QDGMGTGNDD 300 LMRRFNMQSQ NISLPNSQVG SKMDHAAMAQ HQQQSHQLQQ QQQVQQSQQS SAVQQQQAQL 360 LQQNAIHLQQ QQEHLQRQQS LPQQQQEHLQ RQQSQPQQQL KTAASMPSME QHKLREQQPQ 420 GGQAVSQAQM LSQIFQPSSS QLQQLGLPKS PTQRPGFPGL PTASSLQQPA LGQAPQVQQA 480 AEYQQALLQS QQQQLQQLSQ PEMQLQLLQK IQQQNMLSQL NPQHQSQLMQ QLSQKNQEYL 540 QQQILQHQLS GSDAMVQFKQ SHQTPSNNIT GSLTPQQLAR SHSALAESED PSSSTAPSAN 600 RLSPMNSLSR THQGSRNLTD MTTSPHIDNL LQEIQSKPDN RNKNDLQSSK ETIPVPNRYP 660 VSDQLDASSA TSFCLDESPR EGFSFPPVCL DSNAQVDPRD NFLIAENVDS LMPDALLSRG 720 MGSGKDICNL PSGQRDHREV DNELSSAAFS SQSFGVPDIS FKPGCSGDIA VNDGGMPSQG 780 LWNNQTQRMR TFTKVQKRGS VGRSIDITRY TNYDELRHDL ACMFGIQGQL EDPYRMDWKL 840 VYVDHENDIL LVGDDPWEEF VSCVKSIKIL SSVEVQQMSL DGDLGGIPSQ TQACSASDDA 900 NAWRGS

Sequence ? help Back to Top

Protein Sequence Length: 906 aa Download sequence

MQPPAQELMA KDLHDIPWKF RHIFRGQPKR HLLTTGWSVF VSTKRLLAGD SVLFIRDEKS  60
QLLLGIRRAT RPQPALSSSV LSSDSMHIGI LAAAAHAAAN SSPFTIFYNP RASPSEFVIP  120
LAKYNKALYT QVSLGMRFRM LFETEDSGVR RYMGTITGIG DLDPVRWKNS HWRNLQVGWD  180
ESTASERRTR VSIWEIEPVA TPFYICPPPF FRPKLPKQPG MPDDEGEVDS AFKRAMPWLG  240
DDFALKDVQS QLFPGLSLVQ WMAMQQNPQM LPAGAPAVQA PYLNSSAMAM QDGMGTGNDD  300
LMRRFNMQSQ NISLPNSQVG SKMDHAAMAQ HQQQSHQLQQ QQQVQQSQQS SAVQQQQAQL  360
LQQNAIHLQQ QQEHLQRQQS LPQQQQEHLQ RQQSQPQQQL KTAASMPSME QHKLREQQPQ  420
GGQAVSQAQM LSQIFQPSSS QLQQLGLPKS PTQRPGFPGL PTASSLQQPA LGQAPQVQQA  480
AEYQQALLQS QQQQLQQLSQ PEMQLQLLQK IQQQNMLSQL NPQHQSQLMQ QLSQKNQEYL  540
QQQILQHQLS GSDAMVQFKQ SHQTPSNNIT GSLTPQQLAR SHSALAESED PSSSTAPSAN  600
RLSPMNSLSR THQGSRNLTD MTTSPHIDNL LQEIQSKPDN RNKNDLQSSK ETIPVPNRYP  660
VSDQLDASSA TSFCLDESPR EGFSFPPVCL DSNAQVDPRD NFLIAENVDS LMPDALLSRG  720
MGSGKDICNL PSGQRDHREV DNELSSAAFS SQSFGVPDIS FKPGCSGDIA VNDGGMPSQG  780
LWNNQTQRMR TFTKVQKRGS VGRSIDITRY TNYDELRHDL ACMFGIQGQL EDPYRMDWKL  840
VYVDHENDIL LVGDDPWEEF VSCVKSIKIL SSVEVQQMSL DGDLGGIPSQ TQACSASDDA  900
NAWRGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	1e-148	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG019880.1