PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG019400.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ERF

Protein Properties

Length: 385aa MW: 42283.9 Da PI: 4.5111

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG019400.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.5	1.4e-17	142	191	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++G+r+++ +g+W+AeIrdp++ r++lg++ +aeeAa+a++ +++++g TRIDC7AG019400.2 142 QFRGIRRRP-WGKWAAEIRDPRK---GVRVWLGTYNSAEEAARAYDVEARRIRG 191 69*****.******954...4**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
PSSHTTPTDP SRLAFHSSFF CFAPWSHVLP AMCGGAILSD IIPPPRRATG GNVWRADKKK 60 RARADAAAGR PRRAPEEEFE EEGDAEFEAD FEGFVEAEEE SDGEGKPFPV RRSGFSGDGL 120 KATAAGDDDC ASGSAKRKRK NQFRGIRRRP WGKWAAEIRD PRKGVRVWLG TYNSAEEAAR 180 AYDVEARRIR GKKAKVNFPE EAPMAPQQRC ATSVKVPEFN TEQKPVLNTM GNADVYSCPA 240 VDYTINQQFV QPQNMSFVPT VDAVEAPFMN FSSDQGSNSF SCSDFSWEND IKTPDITSVL 300 ASIPTSTEVN ESAFLQNNGI NSTVPPVMGD ANVDLADLEP YMKFLMDDGS DESIDSILSC 360 DVPQDVVGNM GLWTFDDMPL SAGFY

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

PSSHTTPTDP SRLAFHSSFF CFAPWSHVLP AMCGGAILSD IIPPPRRATG GNVWRADKKK  60
RARADAAAGR PRRAPEEEFE EEGDAEFEAD FEGFVEAEEE SDGEGKPFPV RRSGFSGDGL  120
KATAAGDDDC ASGSAKRKRK NQFRGIRRRP WGKWAAEIRD PRKGVRVWLG TYNSAEEAAR  180
AYDVEARRIR GKKAKVNFPE EAPMAPQQRC ATSVKVPEFN TEQKPVLNTM GNADVYSCPA  240
VDYTINQQFV QPQNMSFVPT VDAVEAPFMN FSSDQGSNSF SCSDFSWEND IKTPDITSVL  300
ASIPTSTEVN ESAFLQNNGI NSTVPPVMGD ANVDLADLEP YMKFLMDDGS DESIDSILSC  360
DVPQDVVGNM GLWTFDDMPL SAGFY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	150	KRKRKNQFRGIRRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72360.1	3e-33	ERF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG019400.2