PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG019350.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 480aa MW: 51236.9 Da PI: 4.4542

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG019350.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2e-11	330	375	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L++l+P++ K +K+++L + ++Y+k Lq TRIDC7AG019350.1 330 HSIAERLRREKISERMKNLQDLVPNS-----NKADKSSMLDEIIDYVKFLQ 375 99*********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MDYSNGSFFP SWPDNSASEN YSFVDGSVES YAEEGSMPPA GYFRARSNQN LTFDEHEQNP 60 AMLANGCLPY NTQTDLLSGE ILSEDKPSNS LMELPQLQNN GSLQSNLIPS GTLQCTSTPG 120 TFDLQLDTPG LLELPHALSS SIESNGSEVS AFLADVHAVS SASTLCSTFQ NVPSYMEPVS 180 LEAFSFQGIQ NAAMFNNTSH SNGNLSVFDE ATMASLHDSK EFLSGGISSF GTAEQSQLAG 240 SGLKAEQQEQ NVMCNIPLPF ASGSQMAVSE AQGTLIPSKI SSTIHNNKSE YPVPISHSAD 300 AQNKANSANG NSASAKPRAR ARRGQATDPH SIAERLRREK ISERMKNLQD LVPNSNKADK 360 SSMLDEIIDY VKFLQLQVKV LSMSRLGAPG AVLPLLAESQ TEGHSNSPLS PPTASQGLLD 420 AAGPEDSLVF EQEVIKLMET SITNAMQYLQ NKGLCLMPIA LASAISNQKG TSAAAVPPER

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MDYSNGSFFP SWPDNSASEN YSFVDGSVES YAEEGSMPPA GYFRARSNQN LTFDEHEQNP  60
AMLANGCLPY NTQTDLLSGE ILSEDKPSNS LMELPQLQNN GSLQSNLIPS GTLQCTSTPG  120
TFDLQLDTPG LLELPHALSS SIESNGSEVS AFLADVHAVS SASTLCSTFQ NVPSYMEPVS  180
LEAFSFQGIQ NAAMFNNTSH SNGNLSVFDE ATMASLHDSK EFLSGGISSF GTAEQSQLAG  240
SGLKAEQQEQ NVMCNIPLPF ASGSQMAVSE AQGTLIPSKI SSTIHNNKSE YPVPISHSAD  300
AQNKANSANG NSASAKPRAR ARRGQATDPH SIAERLRREK ISERMKNLQD LVPNSNKADK  360
SSMLDEIIDY VKFLQLQVKV LSMSRLGAPG AVLPLLAESQ TEGHSNSPLS PPTASQGLLD  420
AAGPEDSLVF EQEVIKLMET SITNAMQYLQ NKGLCLMPIA LASAISNQKG TSAAAVPPER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	2e-47	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG019350.1