PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC7AG016070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 156aa MW: 17237.2 Da PI: 8.9512 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.6 | 5.1e-07 | 2 | 37 | 12 | 47 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ + + +G g+Wk I++++ +++t+ q+ s+ qk+ TRIDC7AG016070.1 2 FLYGLEVYGHGDWKNISKHFATTKTPVQVSSHAQKF 37 5667889***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 156 aa Download sequence |
SFLYGLEVYG HGDWKNISKH FATTKTPVQV SSHAQKFFKR IQKKASSGTK HYSINDVRLH 60 DNELLAANNS SVTRQALSFT GLNNDPSFKL QAPTSSLTVM NNQAQCSPSI YNQQVGHQPM 120 WSEQQMMGSV AAVMDGEGNY VPDGQQGSAY FYLGNV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G58900.1 | 2e-15 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC7AG016070.1 |