PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG006050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 24666.6 Da PI: 7.8974 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 59 | 110 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ grWv+e+r p n+ + r++lg+f ++e Aa+a++ a+++l+g TRIDC7AG006050.1 59 PVYRGVRRRGAAGRWVCEVRQP--NN-KSRIWLGTFASPEAAARAHDVAALALRG 110 68****************7776..44.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
SQANTIDSLA TVSADKQTID PCKMDNSGVI FYGGAYATVM SAPPKRPAGR TKFRETRHPV 60 YRGVRRRGAA GRWVCEVRQP NNKSRIWLGT FASPEAAARA HDVAALALRG RAACLNFADS 120 AALLAVDPAT LRTPQDIRAA AITLARAACP HDATRSSVSA ASAPAPAMVI TQEAAAAPYD 180 SYAMYGGLAD LEQHSHCYYD GMSGSGDWQS ISHMNVADED GGYGAGDVAL WSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 1e-23 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG006050.1 |