PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG003540.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 274aa MW: 29257.9 Da PI: 7.8564 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.1 | 1.7e-12 | 129 | 173 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky TRIDC7AG003540.2 129 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 173 7*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
LAAQPTMATQ RAATAAWTNE EDKAFENAVA SGAPPPLDGV PEEDWFAALA ASVPARSTEE 60 VRRHYEALVE DVGAIDAGRV PLPRYAGEDS TPAAAAAPSK DRREDRKSFD SDSGKGCSKA 120 EQERRKGIPW TEEEHRLFLL GLDKFGKGDW RSISRNFVIS RTPTQVASHA QKYFIRLNSM 180 NRDRRRSSIH DITSINNAAQ AVPPITGQAP AALGGPPGGM MKHPGMVGMY GGAPMGHPVA 240 GHMVPAAVGT PVMFPPGPGH PPYAMPVGYP APHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49010.1 | 2e-60 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG003540.2 |