PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG003540.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 268aa    MW: 28676.3 Da    PI: 7.8564
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG003540.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.21.7e-12123167347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
  TRIDC7AG003540.1 123 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 167
                       7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MATQRAATAA WTNEEDKAFE NAVASGAPPP LDGVPEEDWF AALAASVPAR STEEVRRHYE  60
ALVEDVGAID AGRVPLPRYA GEDSTPAAAA APSKDRREDR KSFDSDSGKG CSKAEQERRK  120
GIPWTEEEHR LFLLGLDKFG KGDWRSISRN FVISRTPTQV ASHAQKYFIR LNSMNRDRRR  180
SSIHDITSIN NAAQAVPPIT GQAPAALGGP PGGMMKHPGM VGMYGGAPMG HPVAGHMVPA  240
AVGTPVMFPP GPGHPPYAMP VGYPAPHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.13e-60MYB family protein