PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG069150.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 207aa MW: 21499.6 Da PI: 7.9965 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 118.1 | 5.4e-37 | 16 | 117 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrr+C+++Cv+apyf +eq +++fa++hk+FGasn kll++lp +r +a+ +++yeA+ r+rdPvyG+v+ i++lqqq++ l+a TRIDC6BG069150.2 16 PCGACKFLRRRCVAECVFAPYFSSEQgAARFAAIHKVFGASNAAKLLAHLPLADRCEAVVTITYEAQSRLRDPVYGCVAQIFALQQQVAILQA 108 7***********************9989***************************************************************** PP DUF260 93 elallkeel 101 +l ++++++ TRIDC6BG069150.2 109 QLMQARAQI 117 **9999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MAAAAGGGVA GVAGSPCGAC KFLRRRCVAE CVFAPYFSSE QGAARFAAIH KVFGASNAAK 60 LLAHLPLADR CEAVVTITYE AQSRLRDPVY GCVAQIFALQ QQVAILQAQL MQARAQIACG 120 VQSTTSPVSH HQPQPWLQDT SIAALLRQQE NGSSFAAGGA LLPELMSGDV SMLQQHCGGK 180 VEGGGGGGAG DLQYLAQAMM RSSNYSL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 178 | 186 | GGKVEGGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42430.1 | 9e-45 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG069150.2 |