PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG067880.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 691aa MW: 74838.5 Da PI: 7.4186

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG067880.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.4	3.2e-08	596	645	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r++++ E ellv+av++lG g+Wk + ++ + Rt ++k++w ++ TRIDC6BG067880.1 596 RKPFSVAEVELLVEAVELLGFGRWKNVKNHAFrdnEERTYVDLKDKWKNL 645 7899*************************9999**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
LTPPLRPAGS LCPLGSKGQE MVFRKKSEGG SVVRRPRKRR DTTLAPVKRS ARLKKKQMYA 60 LDLLATVAES LSSDEDDYST ESDQDVAAAS HNSDRAAVKA EQFHEAPQLN STALENDCCR 120 GYTVGCDCIC APLGETSIRK TEDLSTQNVA DTVEGSLIEK ADVDNLLTQN VADAAAEPLI 180 EKKPDVFAEG SLVSCTKPSL LDCGLGTIPE YGTIGVCHPC FPTSADVKQV HQATPAIIGS 240 LVDGNAAALH GLVDTMDLDI KPSVLNSESS SGVHLGGHDN GHNSSPFYPV QVQHAADIDN 300 DEKSTRCVHP STSGSKGGHL SYKGDCRTRR LLSTRMRKAA RNKMCGELPN KGSKFGGKKI 360 SATRRRAQMQ RMLKTKKVVE CYSAQPSDEG VLTETSGTSC SRGGQDPTCA SESSQRKPCA 420 SEGCNVKFII KSFNIPELSI EVPENATVGS LKRIVMDAVT SKIEGSLSVS VLLQGEIIQD 480 DNKTLHQAGI CHGAKPDSIG FTLECEAKQD SRPSGLAPEE MDSAGPSVVN PLSKIKFEQP 540 FISCTLGDYP CEGAAQVRSE ICQAIVPYGT SNPDALAIVP VVPRSRQRDF GQRRKRKPFS 600 VAEVELLVEA VELLGFGRWK NVKNHAFRDN EERTYVDLKD KWKNLVHTAS IPPQLRRGRA 660 IPPQGLLDRV LAAQAYWTVH HAKRDEEEGR D

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

LTPPLRPAGS LCPLGSKGQE MVFRKKSEGG SVVRRPRKRR DTTLAPVKRS ARLKKKQMYA  60
LDLLATVAES LSSDEDDYST ESDQDVAAAS HNSDRAAVKA EQFHEAPQLN STALENDCCR  120
GYTVGCDCIC APLGETSIRK TEDLSTQNVA DTVEGSLIEK ADVDNLLTQN VADAAAEPLI  180
EKKPDVFAEG SLVSCTKPSL LDCGLGTIPE YGTIGVCHPC FPTSADVKQV HQATPAIIGS  240
LVDGNAAALH GLVDTMDLDI KPSVLNSESS SGVHLGGHDN GHNSSPFYPV QVQHAADIDN  300
DEKSTRCVHP STSGSKGGHL SYKGDCRTRR LLSTRMRKAA RNKMCGELPN KGSKFGGKKI  360
SATRRRAQMQ RMLKTKKVVE CYSAQPSDEG VLTETSGTSC SRGGQDPTCA SESSQRKPCA  420
SEGCNVKFII KSFNIPELSI EVPENATVGS LKRIVMDAVT SKIEGSLSVS VLLQGEIIQD  480
DNKTLHQAGI CHGAKPDSIG FTLECEAKQD SRPSGLAPEE MDSAGPSVVN PLSKIKFEQP  540
FISCTLGDYP CEGAAQVRSE ICQAIVPYGT SNPDALAIVP VVPRSRQRDF GQRRKRKPFS  600
VAEVELLVEA VELLGFGRWK NVKNHAFRDN EERTYVDLKD KWKNLVHTAS IPPQLRRGRA  660
IPPQGLLDRV LAAQAYWTVH HAKRDEEEGR D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	40	RKKSEGGSVVRRPRKRR
2	34	41	RRPRKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-57	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG067880.1