PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG067040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 272aa    MW: 30344.6 Da    PI: 10.0674
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG067040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.95.8e-141462355
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      + G+r+++ r rW AeIrdp     +  r +lg+f +aeeAa+a++  +++++g
  TRIDC6BG067040.1 14 FMGIRQRS-RARWGAEIRDPI----KgVRLWLGTFNSAEEAARAYDVEARRIHG 62
                      78***999.8*********72....46************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
PAQRSAKRKS KNQFMGIRQR SRARWGAEIR DPIKGVRLWL GTFNSAEEAA RAYDVEARRI  60
HGKKAKINFP EEPKLPQKSR APPAYPKVPK PSAAQEHSFI PAFNNLVNQN AFVYPSAHFA  120
SKQPLVQPEN VPFVPPMSTI APVEAPVMNM YSDRGSNSFG FSKLGWKYHT KTPDISSIAP  180
ISTIAEGAEH VLVKNNTYNS LVPPVMENNV VNFEPWMRYL MDDSVDEMID SLLNFVVPRD  240
VVSNRTFGAS MPCPSVANFS EGSKPCISGQ RE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.13e-29ERF family protein