PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG060640.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 702aa MW: 73121.6 Da PI: 10.395

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG060640.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.7e-08	92	136	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++WT++Ed l +v++ G g+W I r+ + +Rt q+ rw TRIDC6BG060640.9 92 KAWTKDEDAELMAGVHKCGEGNWLDILRKYNfdSTRTYGQLSQRW 136 68*****************************9999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MYLILSYKLQ ILMYGPSREQ GSSHRANSDV PLLNTPNEKI PRVSSDKQLA QSHRLTNGTG 60 PVSNSKQAPH TGLSPDSFDG NGPHNKKTKK TKAWTKDEDA ELMAGVHKCG EGNWLDILRK 120 YNFDSTRTYG QLSQRWAVIS KRQATTKPAK AKPVTGGYDM KATQKAFFMA LDMPMGKPGG 180 LSTLRSGASQ QSTQHSAPVF GAAAPELKSA TSSSFSLPVP VPSAAPGVVS AQVQVQPPRV 240 QQAPPQAAPS KVSIASIKSR NSSKKQTAQA NPTNAPSSIQ AAAIAAGGRI ATASIATNLL 300 KAAQSPQAVH IRSRGKGSSK TSTSSKASTM AGEPGTQTGS AQHPELLNCS APTPSPTVLI 360 TQSTEQVNVV PEVAGVNPPE QSASAHLLEP DRTLSTTPVP GPCDNMEIDD DSTFCVVTME 420 DLFPEDVKQP ETVSQPEMVR QPETVRPPET VSQPEMVRQS ETVRQPEMVK QPEMVDPKAE 480 EMIDPKDADM LEFDRFVAQG CLTTDYSDKS KGVKIAPGAQ GATASQKKKQ LPTVGKSIPV 540 FRAPVIMKKT KALASHGATL ASTVTSSGLV GTGNAGVLSK AIYRKPAGPG TTGKQNRCQE 600 IMAQKQHAIN SNSSAMARNA APGTGTPARN VAAGVGAPAR NAAPATGTPA KSAAPATGPS 660 AKNAAPASGT PARNTAPATG TPPVRNMAPG TGTPPVRNTA PG

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MYLILSYKLQ ILMYGPSREQ GSSHRANSDV PLLNTPNEKI PRVSSDKQLA QSHRLTNGTG  60
PVSNSKQAPH TGLSPDSFDG NGPHNKKTKK TKAWTKDEDA ELMAGVHKCG EGNWLDILRK  120
YNFDSTRTYG QLSQRWAVIS KRQATTKPAK AKPVTGGYDM KATQKAFFMA LDMPMGKPGG  180
LSTLRSGASQ QSTQHSAPVF GAAAPELKSA TSSSFSLPVP VPSAAPGVVS AQVQVQPPRV  240
QQAPPQAAPS KVSIASIKSR NSSKKQTAQA NPTNAPSSIQ AAAIAAGGRI ATASIATNLL  300
KAAQSPQAVH IRSRGKGSSK TSTSSKASTM AGEPGTQTGS AQHPELLNCS APTPSPTVLI  360
TQSTEQVNVV PEVAGVNPPE QSASAHLLEP DRTLSTTPVP GPCDNMEIDD DSTFCVVTME  420
DLFPEDVKQP ETVSQPEMVR QPETVRPPET VSQPEMVRQS ETVRQPEMVK QPEMVDPKAE  480
EMIDPKDADM LEFDRFVAQG CLTTDYSDKS KGVKIAPGAQ GATASQKKKQ LPTVGKSIPV  540
FRAPVIMKKT KALASHGATL ASTVTSSGLV GTGNAGVLSK AIYRKPAGPG TTGKQNRCQE  600
IMAQKQHAIN SNSSAMARNA APGTGTPARN VAAGVGAPAR NAAPATGTPA KSAAPATGPS  660
AKNAAPASGT PARNTAPATG TPPVRNMAPG TGTPPVRNTA PG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	1e-11	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG060640.9