PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG060640.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 726aa MW: 75520.9 Da PI: 10.1459

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG060640.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.9e-08	117	161	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++WT++Ed l +v++ G g+W I r+ + +Rt q+ rw TRIDC6BG060640.8 117 KAWTKDEDAELMAGVHKCGEGNWLDILRKYNfdSTRTYGQLSQRW 161 68*****************************9999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
AAPSHWGDES DLECEIEPSP KPSNEAAAEA SRFAKILMYG PSREQGSSHR ANSDVPLLNT 60 PNEKIPRVSS DKQLAQSHRL TNGTGPVSNS KQAPHTGLSP DSFDGNGPHN KKTKKTKAWT 120 KDEDAELMAG VHKCGEGNWL DILRKYNFDS TRTYGQLSQR WAVISKRQAT TKPAKAKPVT 180 GGYDMKATQK AFFMALDMPM GKPGGLSTLR SGASQQSTQH SAPVFGAAAP ELKSATSSSF 240 SLPVPVPSAA PGVVSAQVQV QPPRVQQAPP QAAPSKVSIA SIKSRNSSKK QTAQANPTNA 300 PSSIQAAAIA AGGRIATASI ATNLLKAAQS PQAVHIRSRG KGSSKTSTSS KASTMAGEPG 360 TQTGSAQHPE LLNCSAPTPS PTVLITQSTE QVNVVPEVAG VNPPEQSASA HLLEPDRTLS 420 TTPVPGPCDN MEIDDDSTFC VVTMEDLFPE DVKQPETVSQ PEMVRQPETV RPPETVSQPE 480 MVRQSETVRQ PEMVKQPEMV DPKAEEMIDP KDADMLEFDR FVAQGCLTTD YSDKSKGVKI 540 APGAQGATAS QKKKQLPTVG KSIPVFRAPV IMKKTKALAS HGATLASTVT SSGLVGTGNA 600 GVLSKAIYRK PAGPGTTGKQ NRCQEIMAQK QHAINSNSSA MARNAAPGTG TPARNVAAGV 660 GAPARNAAPA TGTPAKSAAP ATGPSAKNAA PASGTPARNT APATGTPPVR NMAPGTGTPP 720 VRNTAP

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

AAPSHWGDES DLECEIEPSP KPSNEAAAEA SRFAKILMYG PSREQGSSHR ANSDVPLLNT  60
PNEKIPRVSS DKQLAQSHRL TNGTGPVSNS KQAPHTGLSP DSFDGNGPHN KKTKKTKAWT  120
KDEDAELMAG VHKCGEGNWL DILRKYNFDS TRTYGQLSQR WAVISKRQAT TKPAKAKPVT  180
GGYDMKATQK AFFMALDMPM GKPGGLSTLR SGASQQSTQH SAPVFGAAAP ELKSATSSSF  240
SLPVPVPSAA PGVVSAQVQV QPPRVQQAPP QAAPSKVSIA SIKSRNSSKK QTAQANPTNA  300
PSSIQAAAIA AGGRIATASI ATNLLKAAQS PQAVHIRSRG KGSSKTSTSS KASTMAGEPG  360
TQTGSAQHPE LLNCSAPTPS PTVLITQSTE QVNVVPEVAG VNPPEQSASA HLLEPDRTLS  420
TTPVPGPCDN MEIDDDSTFC VVTMEDLFPE DVKQPETVSQ PEMVRQPETV RPPETVSQPE  480
MVRQSETVRQ PEMVKQPEMV DPKAEEMIDP KDADMLEFDR FVAQGCLTTD YSDKSKGVKI  540
APGAQGATAS QKKKQLPTVG KSIPVFRAPV IMKKTKALAS HGATLASTVT SSGLVGTGNA  600
GVLSKAIYRK PAGPGTTGKQ NRCQEIMAQK QHAINSNSSA MARNAAPGTG TPARNVAAGV  660
GAPARNAAPA TGTPAKSAAP ATGPSAKNAA PASGTPARNT APATGTPPVR NMAPGTGTPP  720
VRNTAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	9e-17	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG060640.8