PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG060640.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 729aa MW: 76188 Da PI: 10.6818

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG060640.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.9e-08	123	167	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++WT++Ed l +v++ G g+W I r+ + +Rt q+ rw TRIDC6BG060640.7 123 KAWTKDEDAELMAGVHKCGEGNWLDILRKYNfdSTRTYGQLSQRW 167 68*****************************9999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
SRTSRTAAPS HWVMRATWSV RLNPLLSRAT KPQLRPHGSP RILMYGPSRE QGSSHRANSD 60 VPLLNTPNEK IPRVSSDKQL AQSHRLTNGT GPVSNSKQAP HTGLSPDSFD GNGPHNKKTK 120 KTKAWTKDED AELMAGVHKC GEGNWLDILR KYNFDSTRTY GQLSQRWAVI SKRQATTKPA 180 KAKPVTGGYD MKATQKAFFM ALDMPMGKPG GLSTLRSGAS QQSTQHSAPV FGAAAPELKS 240 ATSSSFSLPV PVPSAAPGVV SAQVQVQPPR VQQAPPQAAP SKVSIASIKS RNSSKKQTAQ 300 ANPTNAPSSI QAAAIAAGGR IATASIATNL LKAAQSPQAV HIRSRGKGSS KTSTSSKAST 360 MAGEPGTQTG SAQHPELLNC SAPTPSPTVL ITQSTEQVNV VPEVAGVNPP EQSASAHLLE 420 PDRTLSTTPV PGPCDNMEID DDSTFCVVTM EDLFPEDVKQ PETVSQPEMV RQPETVRPPE 480 TVSQPEMVRQ SETVRQPEMV KQPEMVDPKA EEMIDPKDAD MLEFDRFVAQ GCLTTDYSDK 540 SKGVKIAPGA QGATASQKKK QLPTVGKSIP VFRAPVIMKK TKALASHGAT LASTVTSSGL 600 VGTGNAGVLS KAIYRKPAGP GTTGKQNRCQ EIMAQKQHAI NSNSSAMARN AAPGTGTPAR 660 NVAAGVGAPA RNAAPATGTP AKSAAPATGP SAKNAAPASG TPARNTAPAT GTPPVRNMAP 720 GTGTPPVRN

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

SRTSRTAAPS HWVMRATWSV RLNPLLSRAT KPQLRPHGSP RILMYGPSRE QGSSHRANSD  60
VPLLNTPNEK IPRVSSDKQL AQSHRLTNGT GPVSNSKQAP HTGLSPDSFD GNGPHNKKTK  120
KTKAWTKDED AELMAGVHKC GEGNWLDILR KYNFDSTRTY GQLSQRWAVI SKRQATTKPA  180
KAKPVTGGYD MKATQKAFFM ALDMPMGKPG GLSTLRSGAS QQSTQHSAPV FGAAAPELKS  240
ATSSSFSLPV PVPSAAPGVV SAQVQVQPPR VQQAPPQAAP SKVSIASIKS RNSSKKQTAQ  300
ANPTNAPSSI QAAAIAAGGR IATASIATNL LKAAQSPQAV HIRSRGKGSS KTSTSSKAST  360
MAGEPGTQTG SAQHPELLNC SAPTPSPTVL ITQSTEQVNV VPEVAGVNPP EQSASAHLLE  420
PDRTLSTTPV PGPCDNMEID DDSTFCVVTM EDLFPEDVKQ PETVSQPEMV RQPETVRPPE  480
TVSQPEMVRQ SETVRQPEMV KQPEMVDPKA EEMIDPKDAD MLEFDRFVAQ GCLTTDYSDK  540
SKGVKIAPGA QGATASQKKK QLPTVGKSIP VFRAPVIMKK TKALASHGAT LASTVTSSGL  600
VGTGNAGVLS KAIYRKPAGP GTTGKQNRCQ EIMAQKQHAI NSNSSAMARN AAPGTGTPAR  660
NVAAGVGAPA RNAAPATGTP AKSAAPATGP SAKNAAPASG TPARNTAPAT GTPPVRNMAP  720
GTGTPPVRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	1e-11	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG060640.7